RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CTTNBP2NLQ9P2B4 639 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 SERPINA10Q9UK55 444 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 PLCH1Q4KWH8 1693 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 GALCP54803 685 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 AUHQ13825 339 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 GRM4Q14833 912 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 TMED2Q15363 201 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 C12orf60Q5U649 245 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 FAM13CQ8NE31 585 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 CENPTQ96BT3 561 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 AK8Q96MA6 479 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 KIAA1683Q9H0B3 1180 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 TBCAO75347 108 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 NTSR2O95665 410 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 RPL21P46778 160 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 MESDQ14696 234 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 KYNUQ16719 465 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 LRRC36Q1X8D7 754 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 RAD54LQ92698 747 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 PWWP2AQ96N64 755 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 MYH2Q9UKX2 1941 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 THAP12O43422 761 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 OPHN1O60890 802 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 MYBP10242 640 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SKIP12755 728 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SCNN1DP51172 638 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SYCE1Q8N0S2 351 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 GUF1Q8N442 669 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SLC35G2Q8TBE7 412 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SNRNP27Q8WVK2 155 aaKnown RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 SLCO1B3Q9NPD5 702 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
VAMP1-201ENST00000361716 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-201ENST00000361716 LRP6O75581 1613 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 TPP2P29144 1249 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 RASSF2P50749 326 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ZRSR2Q15696 482 aaKnown RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 KLHL23Q8NBE8 558 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 PHC3Q8NDX5 983 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 TBC1D10AQ9BXI6 508 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 MOV10L1Q9BXT6 1211 aaKnown RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 WDR35Q9P2L0 1181 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 MYL1P05976 194 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 PPP1R2P41236 205 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 LRRC63Q05C16 580 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ECM1Q16610 540 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ZC2HC1CQ53FD0 456 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ELMO3Q96BJ8 720 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 PGM2Q96G03 612 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 DDX39AO00148 427 aaKnown RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 BCL9O00512 1426 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 UFL1O94874 794 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 UNC5CO95185 931 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 GSTT1P30711 240 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 CCDC137Q6PK04 289 aaKnown RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 HS2ST1Q7LGA3 356 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 FAM118BQ9BPY3 351 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
VAMP1-201ENST00000361716 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
VAMP1-201ENST00000361716 CAPN9O14815 690 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 PEX11AO75192 247 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 ECEL1O95672 775 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 UCHL3P15374 230 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 GM2AP17900 193 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 CACNB3P54284 484 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 VPS72Q15906 364 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 DBN1Q16643 649 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms