RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 BLOC1S4Q9NUP1 217 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 B4DLN1 442 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 DLL1O00548 723 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 CTSBP07858 339 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 TUBB4BP68371 445 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 FAM193AP78312 1265 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 NFKB2Q00653 900 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 PTSQ03393 145 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 GRB10Q13322 594 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 SLC9A7Q96T83 725 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 NUP58Q9BVL2 599 aa8.08□□□□□ -1.12
CLCN3-202ENST00000360642 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
CLCN3-202ENST00000360642 MAGEC2Q9UBF1 373 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-202ENST00000360642 AKR1B1P15121 316 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 PDIA5Q14554 519 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 SLC10A6Q3KNW5 377 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CENPPQ6IPU0 288 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 MSANTD4Q8NCY6 345 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CCDC47Q96A33 483 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 COA7Q96BR5 231 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CALML4Q96GE6 196 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 BHLHE41Q9C0J9 482 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CCDC113Q9H0I3 377 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 ANKZF1Q9H8Y5 726 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 DDX4Q9NQI0 724 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 DNAJB12Q9NXW2 375 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 RAB21Q9UL25 225 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 MYO3BQ8WXR4 1341 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 PVALEFA0A1B0GWK0 134 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CCDC151A5D8V7 595 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 SLC37A4O43826 429 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 TXKP42681 527 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 ASIC1P78348 528 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CALCRLQ16602 461 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 KIF4BQ2VIQ3 1234 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 FIGNQ5HY92 759 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 FAM114A1Q8IWE2 563 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CERS5Q8N5B7 392 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CNOT6LQ96LI5 555 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 ERGIC2Q96RQ1 377 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 TARS2Q9BW92 718 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 RIC8AQ9NPQ8 531 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 AGPAT5Q9NUQ2 364 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 A0A1W2PQJ5 194 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 PSMD14O00487 310 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 TTLL1O95922 423 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 ADCY7P51828 1080 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 HERVK_113P62684 666 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 CDK17Q00537 523 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 BRD3Q15059 726 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 WHAMMP3Q1A5X7 153 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 GPBAR1Q8TDU6 330 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 FUT8Q9BYC5 575 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 GREB1LQ9C091 1923 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 SMG9Q9H0W8 520 aaKnown RBP8.07□□□□□ -1.12
CLCN3-202ENST00000360642 HAUS4Q9H6D7 363 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 SWAP70Q9UH65 585 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 ATP6V0A2Q9Y487 856 aa8.07□□□□□ -1.12
CLCN3-202ENST00000360642 MYMKA6NI61 221 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 POTECB2RU33 542 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 PPP1R11O60927 126 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 TDP2O95551 362 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 RAG1P15918 1043 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 KLK7P49862 253 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 TCEA2Q15560 299 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 DPP8Q6V1X1 898 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 UNC13DQ70J99 1090 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 LRRC47Q8N1G4 583 aaKnown RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 COG1Q8WTW3 980 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 HPS3Q969F9 1004 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 MTMR8Q96EF0 704 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 ARFGAP3Q9NP61 516 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 PUF60Q9UHX1 559 aaKnown RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 HOXA7P31268 230 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 SHMT1P34896 483 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 ZBED6P86452 979 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 PICALMQ13492 652 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 TMEM119Q4V9L6 283 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 ADGRF4Q8IZF3 695 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 LARP4BQ92615 738 aaKnown RBP8.06□□□□□ -1.12
CLCN3-202ENST00000360642 TRIM10Q9UDY6 481 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 SERPINB13Q9UIV8 391 aa8.06□□□□□ -1.12
CLCN3-202ENST00000360642 BLACEA4D250 179 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms