RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AKT3Q9Y243 479 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 DNAH12Q6ZR08 3092 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 SLC16A3O15427 465 aaKnown RBP19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 TREHO43280 583 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 PIGRP01833 764 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 EFNA5P52803 228 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 PTENP60484 403 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 STRN3Q13033 797 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 NBPF20Q3BBV1 942 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 C7orf31Q8N865 590 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 PPP1R16BQ96T49 567 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 NOC4LQ9BVI4 516 aaKnown RBP19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 MINDY3Q9H8M7 445 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 ZKSCAN5Q9Y2L8 839 aa19.86■□□□□ 0.77
SMARCD3-202ENST00000356800 C17orf102A2RUQ5 167 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 TTLL13PA6NNM8 815 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 HNRNPDLO14979 420 aaKnown RBP19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 MSCO60682 206 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 POU5F1BQ06416 359 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 MAN2A1Q16706 1144 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 ARMCX5Q6P1M9 558 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 FRMD5Q7Z6J6 570 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 ZBTB8OSQ8IWT0 167 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 MAP7D2Q96T17 732 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 NFKBIZQ9BYH8 718 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 FAM49AQ9H0Q0 323 aaPredicted RBP19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 C2orf40Q9H1Z8 148 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 HSPBP1Q9NZL4 362 aa19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMARCD3-202ENST00000356800 A0A087WZ62 844 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 SMIM35A0A1B0GVV1 85 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 TPM2P07951 284 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 CYP2C9P11712 490 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 MBTD1Q05BQ5 628 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 VWA3BQ502W6 1294 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 IFNLR1Q8IU57 520 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 BICD1Q96G01 975 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 FDXACB1Q9BRP7 624 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 MKNK1Q9BUB5 465 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 TARS2Q9BW92 718 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 GRIN2DO15399 1336 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 BRCA2P51587 3418 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 ESPNB1AK53 854 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 IQCF3P0C7M6 154 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 EPB41P11171 864 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 PSMC2P35998 433 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 GPC3P51654 580 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 UBXN1Q04323 297 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 TBX2Q13207 712 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 RNF180Q86T96 592 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 LRRC8AQ8IWT6 810 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 FAM186BQ8IYM0 893 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 PCSK9Q8NBP7 692 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 HAPLN2Q9GZV7 340 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 UNC93B1Q9H1C4 597 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 KCNF1Q9H3M0 494 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 FZD8Q9H461 694 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 ARMCX3Q9UH62 379 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 GTF2IRD1Q9UHL9 959 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 STYXL1Q9Y6J8 313 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 ITIH6Q6UXX5 1313 aa19.84■□□□□ 0.77
SMARCD3-202ENST00000356800 EXOC3O60645 756 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 PRKCBP05771 671 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 PHKA2P46019 1235 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 LIG4P49917 911 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 NLRP11P59045 1033 aaKnown RBP19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 MAPK6Q16659 721 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 XXYLT1Q8NBI6 393 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 CCDC150Q8NCX0 1101 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 ZBTB45Q96K62 511 aaPredicted RBP19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 ADAMTS10Q9H324 1103 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 NDST4Q9H3R1 872 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 FRMD4BQ9Y2L6 1034 aa19.83■□□□□ 0.76
SMARCD3-202ENST00000356800 A0A1W2PQC6 194 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 INO80B-WBP1J3KQ70 363 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 PES1O00541 588 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 CSDE1O75534 798 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 GNAT1P11488 350 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 GARTP22102 1010 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 ACLYP53396 1101 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 TMEM62Q0P6H9 643 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 GDF6Q6KF10 455 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 CACTINQ8WUQ7 758 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 DNAJB3Q8WWF6 145 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 POMGNT1Q8WZA1 660 aa19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 ZNF830Q96NB3 372 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 INO80BQ9C086 356 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 METTL14Q9HCE5 456 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMARCD3-202ENST00000356800 GOLGA8IPA6NC78 632 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 GOLGA8JA6NMD2 632 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 GPR32O75388 356 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ZPBP2Q6X784 338 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 RDH13Q8NBN7 331 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 NLRP7Q8WX94 980 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 SAAL1Q96ER3 474 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 FBXL18Q96ME1 805 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ACO2Q99798 780 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms