RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 DYDC1Q8WWB3 177 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 USP6NLQ92738 828 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 P2RX5Q93086 422 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 TEPSINQ96N21 525 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 RBBP6Q7Z6E9 1792 aaKnown RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 PP2D1A8MPX8 630 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 LDHBP07195 334 aaKnown RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 CLTAP09496 248 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 CYP2D6P10635 497 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 PIK3CAP42336 1068 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SPRED3Q2MJR0 410 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 LSM14AQ8ND56 463 aaKnown RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 OSBPL7Q9BZF2 842 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SNX12Q9UMY4 172 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 LGR5O75473 907 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SCTRP47872 440 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 KLK7P49862 253 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 DTHD1Q6ZMT9 781 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 BTN2A1Q7KYR7 527 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 GSDMBQ8TAX9 411 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 NDNQ99608 321 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 OSBPL10Q9BXB5 764 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 MYH4Q9Y623 1939 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 ENC1O14682 589 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 PSMA7O14818 248 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 TMCC1O94876 653 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 CYP1A2P05177 515 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 OXCT1P55809 520 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 RIPK1Q13546 671 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 FKBP1CQ5VVH2 108 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
SND1-201ENST00000354725 LDHDQ86WU2 507 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 IDI2Q9BXS1 227 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
SND1-201ENST00000354725 ABLIM1O14639 778 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 KRT86O43790 486 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 SRGAP2O75044 1071 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 HSD17B7P56937 341 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CCDC122Q5T0U0 273 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.543e-11■■■□□ 15.9
SND1-201ENST00000354725 BAP1Q92560 729 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CEP63Q96MT8 703 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.54
SND1-201ENST00000354725 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 ARHGAP20Q9P2F6 1191 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 TMA7Q9Y2S6 64 aaKnown RBP11.65□□□□□ -0.54
SND1-201ENST00000354725 PLIN4Q96Q06 1357 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.54
SND1-201ENST00000354725 LSP1P33241 339 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 STK4Q13043 487 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
SND1-201ENST00000354725 ERICH1Q86X53 443 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 LZICQ8WZA0 190 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CCT8L2Q96SF2 557 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
SND1-201ENST00000354725 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
SND1-201ENST00000354725 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.55
SND1-201ENST00000354725 BNIP1Q12981 228 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 ADAM9Q13443 819 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 CAVIN3Q969G5 261 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 SELENOOQ9BVL4 669 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 PPP1R9AQ9ULJ8 1098 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 PTPRFP10586 1907 aa11.65□□□□□ -0.55
SND1-201ENST00000354725 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 G3V3G9 751 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 PFDN1O60925 122 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 PLCG1P19174 1290 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 ZC3H3Q8IXZ2 948 aaKnown RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 ZNF713Q8N859 430 aaPredicted RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 GPKOWQ92917 476 aaPredicted RBP eCLIP11.64□□□□□ -0.552e-11■□□□□ 9.7
SND1-201ENST00000354725 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 SPC25Q9HBM1 224 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 ZNF70Q9UC06 446 aaPredicted RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 ESYT2A0FGR8 921 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 HOXD12P35452 270 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms