RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 RIT2Q99578 217 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 FDXACB1Q9BRP7 624 aaPredicted RBP17.7■□□□□ 0.42
COPE-202ENST00000349893 HERC2P3Q9BVR0 1158 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 GBP3Q9H0R5 595 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 RXFP1Q9HBX9 757 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.42
COPE-202ENST00000349893 KANSL3Q9P2N6 904 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 SSX2IPQ9Y2D8 614 aa17.7■□□□□ 0.42
COPE-202ENST00000349893 MTCL1Q9Y4B5 1905 aaKnown RBP17.69■□□□□ 0.42
COPE-202ENST00000349893 ZBTB43O43298 467 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 STBD1O95210 358 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 ALDH2P05091 517 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
COPE-202ENST00000349893 LAMP2P13473 410 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
COPE-202ENST00000349893 RCAN1P53805 252 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 STARD6P59095 220 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 HTR4Q13639 388 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 RSPO4Q2I0M5 234 aaPredicted RBP17.69■□□□□ 0.42
COPE-202ENST00000349893 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 KIAA0319Q5VV43 1072 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 REXO1Q8N1G1 1221 aaKnown RBP17.69■□□□□ 0.42
COPE-202ENST00000349893 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 HINFPQ9BQA5 517 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 AGPAT5Q9NUQ2 364 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 MARCH5Q9NX47 278 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 FAN1Q9Y2M0 1017 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 PCDHB2Q9Y5E7 798 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 CNTNAP2Q9UHC6 1331 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 CHD6Q8TD26 2715 aa17.69■□□□□ 0.42
COPE-202ENST00000349893 CHD8Q9HCK8 2581 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 POTEMA6NI47 508 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 NRP1O14786 923 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 MSH4O15457 936 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 EDIL3O43854 480 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 GLUD1P00367 558 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 URODP06132 367 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 JAK3P52333 1124 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
COPE-202ENST00000349893 DCLRE1AQ6PJP8 1040 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 POTEGQ6S5H5 508 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 SMG7Q92540 1137 aaKnown RBP17.68■□□□□ 0.42
COPE-202ENST00000349893 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
COPE-202ENST00000349893 MIA3Q5JRA6 1907 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 SPTLC1O15269 473 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
COPE-202ENST00000349893 MAFO75444 373 aaPredicted RBP17.67■□□□□ 0.42
COPE-202ENST00000349893 RFPL2O75678 378 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 SDHBP21912 280 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 CDC27P30260 824 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 DNM2P50570 870 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 B3GNT9Q6UX72 402 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 CATSPER4Q7RTX7 472 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 GPR65Q8IYL9 337 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 DDX23Q9BUQ8 820 aaKnown RBP17.67■□□□□ 0.42
COPE-202ENST00000349893 PLEKHA4Q9H4M7 779 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 RSAD1Q9HA92 442 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 ZDHHC7Q9NXF8 308 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 FBXO4Q9UKT5 387 aa17.67■□□□□ 0.42
COPE-202ENST00000349893 GLUD2P49448 558 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 AK2P54819 239 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 DSG1Q02413 1049 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 TAS1R1Q7RTX1 841 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 COLGALT2Q8IYK4 626 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 GPR161Q8N6U8 529 aaKnown RBP17.66■□□□□ 0.42
COPE-202ENST00000349893 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
COPE-202ENST00000349893 FOXQ1Q9C009 403 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 NT5C3AQ9H0P0 336 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 UNC45AQ9H3U1 944 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 CHST7Q9NS84 486 aa17.66■□□□□ 0.42
COPE-202ENST00000349893 SUCLA2Q9P2R7 463 aaPredicted RBP17.66■□□□□ 0.42
COPE-202ENST00000349893 ZFP37Q9Y6Q3 630 aaPredicted RBP17.66■□□□□ 0.42
COPE-202ENST00000349893 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
COPE-202ENST00000349893 USP24Q9UPU5 2620 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 GOLGA8BA8MQT2 603 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 C2CD2LO14523 706 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 GAS7O60861 476 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 PSMD10O75832 226 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 HOXA11P31270 313 aaPredicted RBP17.65■□□□□ 0.42
COPE-202ENST00000349893 DSC1Q08554 894 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 VARS2Q5ST30 1063 aaKnown RBP17.65■□□□□ 0.42
COPE-202ENST00000349893 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 RHPN2Q8IUC4 686 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 NELL1Q92832 810 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 SHDQ96IW2 340 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 FAM193BQ96PV7 902 aaPredicted RBP17.65■□□□□ 0.42
COPE-202ENST00000349893 OSBPL6Q9BZF3 934 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 SEPT9Q9UHD8 586 aaPredicted RBP17.65■□□□□ 0.42
COPE-202ENST00000349893 NUMBLQ9Y6R0 609 aa17.65■□□□□ 0.42
COPE-202ENST00000349893 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
COPE-202ENST00000349893 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms