RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 PDIA5Q14554 519 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 RAPH1Q70E73 1250 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 MTMR4Q9NYA4 1195 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 NOVA2Q9UNW9 492 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 EXOC1LA0A1B0GW35 172 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 SH3BGRP55822 239 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 DBN1Q16643 649 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 ZNF667Q5HYK9 610 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 TRPM4Q8TD43 1214 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 NFU1Q9UMS0 254 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 FAM83AQ86UY5 434 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 CAV1Q03135 178 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 KIF3CO14782 793 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 GPC4O75487 556 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 CALB1P05937 261 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 PSMA2P25787 234 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 QARSP47897 775 aaKnown RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 MID2Q9UJV3 735 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 PCDHB7Q9Y5E2 793 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
DNMT1-201ENST00000340748 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-201ENST00000340748 IQANK1A0A1B0GTG1 560 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 STAT5BP51692 787 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 NFIAQ12857 509 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 KRT39Q6A163 491 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 THNSL1Q8IYQ7 743 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 MTRQ99707 1265 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 ADAM22Q9P0K1 906 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CPSF2Q9P2I0 782 aaKnown RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 MAP2K2P36507 400 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 MAPK6Q16659 721 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 SCARA5Q6ZMJ2 495 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 SRBD1Q8N5C6 995 aaKnown RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 TMEM35BQ8NCS4 154 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 SENP6Q9GZR1 1112 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 BAG2O95816 211 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 PGK2P07205 417 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 KRT17Q04695 432 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CEP120Q8N960 986 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 DNAAF3Q8N9W5 541 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 SMARCAD1Q9H4L7 1026 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 STRIP2Q9ULQ0 834 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 VWDEQ8N2E2 1590 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CLDN3O15551 220 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 VAMP7P51809 220 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 FRMD5Q7Z6J6 570 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 PCGF5Q86SE9 256 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 RYBPQ8N488 228 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 PGBD4Q96DM1 585 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 INTS2Q9H0H0 1204 aaKnown RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-201ENST00000340748 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
DNMT1-201ENST00000340748 A0A087WUV0 522 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 TTI1O43156 1089 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 ZBED1O96006 694 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 MYBL1P10243 752 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 THPOP40225 353 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 HDAC11Q96DB2 347 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 LIMA1Q9UHB6 759 aaKnown RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 PIN4Q9Y237 131 aaKnown RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 PSMC5P62195 406 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 C2orf40Q9H1Z8 148 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms