RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PCSK7Q16549 785 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 C11orf70Q9BRQ4 267 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 WDR47O94967 919 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 HMOX2P30519 316 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 SOAT1P35610 550 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PNMA6FA0A0J9YX94 578 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 A8MXQ7 604 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 KRT8P05787 483 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 GSNP06396 782 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 CTSHP09668 335 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 LRRC14Q15048 493 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 TOGARAM2Q6ZUX3 1019 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF302Q9NR11 478 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 ZSWIM5Q9P217 1185 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 CASP1P29466 404 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 TSC22D3Q99576 134 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 GNA15P30679 374 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 CYTH1Q15438 398 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 DMAP1Q9NPF5 467 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 HOXB7P09629 217 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 HOXD10P28358 340 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 GFPT1Q06210 699 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 ALFQ53S48 1182 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 FAM102AQ5T9C2 384 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 C10orf53Q8N6V4 93 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 CNOT10Q9H9A5 744 aaKnown RBP12.49□□□□□ -0.41
SHANK2-201ENST00000338508 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
SHANK2-201ENST00000338508 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 GCFC2P16383 781 aaKnown RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ADCY2Q08462 1091 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 PTPRKQ15262 1439 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 PROSER3Q2NL68 480 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 V9GYQ6 96 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 PPP6R2O75170 966 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 TADA2AO75478 443 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ABCD1P33897 745 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 KCNJ6P48051 423 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ANKRD49Q8WVL7 239 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RNF181Q9P0P0 153 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 C2CD2LO14523 706 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 MMP1P03956 469 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RAD51Q06609 339 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ANKMY2Q8IV38 441 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 COG1Q8WTW3 980 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 NDST4Q9H3R1 872 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 PRRG1O14668 218 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF197O14709 1029 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RALAP11233 206 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 NLRP11P59045 1033 aaKnown RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 NDUFA10O95299 355 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 HNRNPCP07910 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ROR1Q01973 937 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
SHANK2-201ENST00000338508 SNX31Q8N9S9 440 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ATP11CQ8NB49 1132 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ICA1LQ8NDH6 482 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 ATP11BQ9Y2G3 1177 aa12.48□□□□□ -0.41
SHANK2-201ENST00000338508 POTEMA6NI47 508 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 DTNAQ9Y4J8 743 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
SHANK2-201ENST00000338508 CYBBP04839 570 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms