RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 TPTE2Q6XPS3 522 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF662Q6ZS27 426 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 EPS8L3Q8TE67 593 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 BCL9LQ86UU0 1499 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 DNAJC6O75061 913 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 NOL4O94818 638 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 LDHCP07864 332 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 CBX3Q13185 183 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 RCN1Q15293 331 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 USH1GQ495M9 461 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 MCUR1Q96AQ8 359 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 NUP98P52948 1817 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 SMAPO00193 183 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 CHMP2AO43633 222 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ACSL3O95573 720 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 FGGP02679 453 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 EXOC3L4Q17RC7 722 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 PRR16Q569H4 304 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF571Q7Z3V5 609 aaPredicted RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 TRIM50Q86XT4 487 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 RBM12BQ8IXT5 1001 aaKnown RBP12.72□□□□□ -0.37
LIMK2-202ENST00000333611 METTL13Q8N6R0 699 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 DTNBP1Q96EV8 351 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 SMC6Q96SB8 1091 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 GDF3Q9NR23 364 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 UBAP1Q9NZ09 502 aa12.72□□□□□ -0.37
LIMK2-202ENST00000333611 GCNT3O95395 438 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ATP6V1C1P21283 382 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 HNRNPH3P31942 346 aaKnown RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ANKRD23Q86SG2 305 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 SPATA24Q86W54 205 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 DAGLBQ8NCG7 672 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 RNPEPL1Q9HAU8 725 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ZNF180Q9UJW8 692 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 DAAM1Q9Y4D1 1078 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 LRRN2O75325 713 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 GSTA1P08263 222 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 CALB2P22676 271 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 HSPA9P38646 679 aaKnown RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 CASP5P51878 434 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 GSTO1P78417 241 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 RIPK1Q13546 671 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 VPS52Q8N1B4 723 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 INPP4AQ96PE3 977 aaPredicted RBP12.71□□□□□ -0.37
LIMK2-202ENST00000333611 PSTPIP2Q9H939 334 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ARHGEF38Q9NXL2 777 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 ATXN10Q9UBB4 475 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 SLC12A4Q9UP95 1085 aa12.71□□□□□ -0.37
LIMK2-202ENST00000333611 CBX6O95503 412 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 RASSF2P50749 326 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 GALK1P51570 392 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 ZBTB16Q05516 673 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.38
LIMK2-202ENST00000333611 TTC1Q99614 292 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.38
LIMK2-202ENST00000333611 TMA7Q9Y2S6 64 aaKnown RBP12.71□□□□□ -0.38
LIMK2-202ENST00000333611 COL4A1P02462 1669 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 TIAM2Q8IVF5 1701 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
LIMK2-202ENST00000333611 H2AFZP0C0S5 128 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 AKR1B1P15121 316 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 H2AFVQ71UI9 128 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 SFR1Q86XK3 245 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 FITM2Q8N6M3 262 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 IQCDQ96DY2 449 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 LRRC27Q9C0I9 530 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 OSGEPQ9NPF4 335 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 PTPN22Q9Y2R2 807 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 GSTTP1A0A1W2PQM5 241 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 PJA2O43164 708 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 CASP4P49662 377 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
LIMK2-202ENST00000333611 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms