RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 CHD7Q9P2D1 2997 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 A0A1B0GUA9 196 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 RFXAPO00287 272 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 ACKR2O00590 384 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 KRT18P05783 430 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 ARF4P18085 180 aaPredicted RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 POU3F3P20264 500 aaPredicted RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 CTNNB1P35222 781 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 NPTX2P47972 431 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 GATMP50440 423 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 DNM1Q05193 864 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 RAD51AP2Q09MP3 1159 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 MCM6Q14566 821 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 AMHR2Q16671 573 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 TMEM132AQ24JP5 1023 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 SPOUT1Q5T280 376 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 SPRED2Q7Z698 418 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 GPBP1Q86WP2 473 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 DAW1Q8N136 415 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 LARP4BQ92615 738 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 CPB2Q96IY4 423 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 CASD1Q96PB1 797 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 UBN1Q9NPG3 1134 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 KMT5AQ9NQR1 393 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 AAASQ9NRG9 546 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 LMCD1Q9NZU5 365 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 RCOR1Q9UKL0 485 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 ODF2LQ9ULJ1 636 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
LIMS1-201ENST00000332345 COL4A6Q14031 1691 aa15.46■□□□□ 0.07
LIMS1-201ENST00000332345 EPOPA6NHQ4 379 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 SFI1A8K8P3 1242 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 C5orf67F2Z3F1 127 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 H3BNC9 293 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 ABCB7O75027 752 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 PRKCBP05771 671 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 PLS3P13797 630 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 ME1P48163 572 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 GPM6BQ13491 265 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 PRPF4BQ13523 1007 aaKnown RBP15.45■□□□□ 0.06
LIMS1-201ENST00000332345 ADGRE1Q14246 886 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 NAALADL2Q58DX5 795 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 UBXN11Q5T124 520 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 SLC27A1Q6PCB7 646 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 GLB1LQ6UWU2 654 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 HACE1Q8IYU2 909 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 SPIRE2Q8WWL2 714 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
LIMS1-201ENST00000332345 PANK2Q9BZ23 570 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 TMEM134Q9H6X4 195 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 TYW1Q9NV66 732 aaKnown RBP15.45■□□□□ 0.06
LIMS1-201ENST00000332345 PCDHB12Q9Y5F1 795 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 NLRC5Q86WI3 1866 aa15.45■□□□□ 0.06
LIMS1-201ENST00000332345 RALGAPA2Q2PPJ7 1873 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 NPHP3-ACAD11A0A0J9YXS1 232 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 H0YCG3 227 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 N4BP3O15049 544 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 B4GALT5O43286 388 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 ITGA4P13612 1032 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-201ENST00000332345 LIG1P18858 919 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
LIMS1-201ENST00000332345 STAT6P42226 847 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 KRT85P78386 507 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 NUCB2P80303 420 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 MAPK7Q13164 816 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 PTPROQ16827 1216 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 LONRF3Q496Y0 759 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 APBB1IPQ7Z5R6 666 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-201ENST00000332345 MAFAQ8NHW3 353 aaPredicted RBP15.44■□□□□ 0.06
LIMS1-201ENST00000332345 HELQQ8TDG4 1101 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 ADPGKQ9BRR6 497 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 KIFC3Q9BVG8 833 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 MRPL9Q9BYD2 267 aaKnown RBP15.44■□□□□ 0.06
LIMS1-201ENST00000332345 CCDC113Q9H0I3 377 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 RNF19AQ9NV58 838 aa15.44■□□□□ 0.06
LIMS1-201ENST00000332345 CNTNAP2Q9UHC6 1331 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 OFD1O75665 1012 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 FAM13AO94988 1023 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 LINC00271P0C7V0 271 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 SCP2P22307 547 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 GIT2Q14161 759 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 CSPP1Q1MSJ5 1256 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 LRRC43Q8N309 656 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 MYCT1Q8N699 235 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 LRRC15Q8TF66 581 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 LPPQ93052 612 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 P2RX5Q93086 422 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 REEP2Q9BRK0 252 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms