RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TOM1O60784 492 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 DCTN3O75935 186 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 EPS8L3Q8TE67 593 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 KAT2BQ92831 832 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 SPDL1Q96EA4 605 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 H0Y3Z8 333 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 ATP5HO75947 161 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 NT5DC3Q86UY8 548 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 DNAJC19Q96DA6 116 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 RTFDC1Q9BY42 306 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 SAYSD1Q9NPB0 183 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 DDX3XO00571 662 aaKnown RBP eCLIP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TLR2O60603 784 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 ITIH4Q14624 930 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 SCYL3Q8IZE3 742 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 FAM167BQ9BTA0 163 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CLDN3O15551 220 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 LIG4P49917 911 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 PEX3P56589 373 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 MRPL47Q9HD33 250 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CAMTA1Q9Y6Y1 1673 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TESPA1A2RU30 521 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 RBAK-RBAKDNI3L0D1 243 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 SGK1O00141 431 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CYP26A1O43174 497 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 SMIM24O75264 130 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 ALAS1P13196 640 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CD19P15391 556 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 NSMCE1Q8WV22 266 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 GRAMD1AQ96CP6 724 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CHORDC1Q9UHD1 332 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TRAF3IP3Q9Y228 551 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 GH2P01242 217 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 GHRP10912 638 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 ZNF572Q7Z3I7 529 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TATDN2Q93075 761 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 GANQ9H2C0 597 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 SEMA4AQ9H3S1 761 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 TUFT1Q9NNX1 390 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 CCPG1Q9ULG6 757 aa13.64□□□□□ -0.23
DNMT3A-202ENST00000321117 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 GSTA1P08263 222 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 WDR78Q5VTH9 848 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 SCFD2Q8WU76 684 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 PPP1R9AQ9ULJ8 1098 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 CDH16O75309 829 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 NR1H3Q13133 447 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 TRPC3Q13507 836 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 KYNUQ16719 465 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 CAPRIN2Q6IMN6 1127 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 ZSWIM1Q9BR11 485 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 PCDHB4Q9Y5E5 795 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 C5P01031 1676 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 LAMA4Q16363 1823 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 FOXN3O00409 490 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 ITIH2P19823 946 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 COILP38432 576 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 PIK3CAP42336 1068 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 LGSNQ5TDP6 509 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 SLC35C1Q96A29 364 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 LXNQ9BS40 222 aa13.63□□□□□ -0.23
DNMT3A-202ENST00000321117 GTPBP10A4D1E9 387 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 KRT1P04264 644 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 RARGP13631 454 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 CCND1P24385 295 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 PSMC6P62333 389 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 BTNL9Q6UXG8 535 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms