RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
GINS3-201ENST00000318129 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
GINS3-201ENST00000318129 ATXN2Q99700 1313 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 CTAGE9A4FU28 777 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SEPT4O43236 478 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 KPNA6O60684 536 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 HIP1RO75146 1068 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 MAPTP10636 758 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 PRCPP42785 496 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 TARBP2Q15633 366 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 WHAMMP3Q1A5X7 153 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 MTERF2Q49AM1 385 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 MYCT1Q8N699 235 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 NOA1Q8NC60 698 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 TRPV1Q8NER1 839 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SPC25Q9HBM1 224 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 PDLIM7Q9NR12 457 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 RWDD2AQ9UIY3 292 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 PCDHA2Q9Y5H9 948 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 CAPN7Q9Y6W3 813 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 BICDL2A1A5D9 508 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 TMEM150BA6NC51 233 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 CHUKO15111 745 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 ADCY6O43306 1168 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 FSBPO95073 299 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 POLGP54098 1239 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 RTP1P59025 263 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 PAK1Q13153 545 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SFR1Q86XK3 245 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SMYD4Q8IYR2 804 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 MYOCDQ8IZQ8 938 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 FAM76AQ8TAV0 307 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 NELFBQ8WX92 580 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
GINS3-201ENST00000318129 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
GINS3-201ENST00000318129 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 H3BRB1 525 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 MYO1FO00160 1098 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
GINS3-201ENST00000318129 PLS3P13797 630 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 GJA9P57773 515 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 NKX3-2P78367 333 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 ALCAMQ13740 583 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 FAM102BQ5T8I3 360 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 KLHL10Q6JEL2 608 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 FOXR2Q6PJQ5 311 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 SLC7A3Q8WY07 619 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 C16orf70Q9BSU1 422 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 TUT1Q9H6E5 874 aaKnown RBP11.08□□□□□ -0.64
GINS3-201ENST00000318129 DHX33Q9H6R0 707 aaKnown RBP11.08□□□□□ -0.64
GINS3-201ENST00000318129 TRPC6Q9Y210 931 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 COL1A2P08123 1366 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 ARID2Q68CP9 1835 aa11.08□□□□□ -0.64
GINS3-201ENST00000318129 MYH11P35749 1972 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 RSPH10B2B2RC85 870 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 AGPSO00116 658 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
GINS3-201ENST00000318129 EIF3HO15372 352 aaKnown RBP eCLIP11.07□□□□□ -0.64
GINS3-201ENST00000318129 ZEB2O60315 1214 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
GINS3-201ENST00000318129 RSPH10BP0C881 870 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 RARBP10826 455 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
GINS3-201ENST00000318129 ELNP15502 786 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 CCNE1P24864 410 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 CNGA1P29973 690 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 GGCXP38435 758 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 SMTNP53814 917 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 PPFIA1Q13136 1202 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 MAPK7Q13164 816 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 EMC2Q15006 297 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 ODR4Q5SWX8 454 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 FAM178BQ8IXR5 827 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 PANX2Q96RD6 677 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
GINS3-201ENST00000318129 CD248Q9HCU0 757 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 CTNND2Q9UQB3 1225 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 UBE4BO95155 1302 aa11.07□□□□□ -0.64
GINS3-201ENST00000318129 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms