RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 B4GALT5O43286 388 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
CDC42-201ENST00000315554 MYOGP15173 224 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 CMA1P23946 247 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 GUCY2CP25092 1073 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 PHKA2P46019 1235 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 NDUFA8P51970 172 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 PTENP60484 403 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 GIT2Q14161 759 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 RASIP1Q5U651 963 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 ADALQ6DHV7 355 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 SV2BQ7L1I2 683 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 CDR2LQ86X02 465 aaPredicted RBP8.69□□□□□ -1.02
CDC42-201ENST00000315554 DEPTORQ8TB45 409 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 IFT74Q96LB3 600 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 ADAM2Q99965 735 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 MTIF3Q9H2K0 278 aaKnown RBP8.69□□□□□ -1.02
CDC42-201ENST00000315554 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 TCHHQ07283 1943 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 LOXHD1Q8IVV2 1947 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 ABHD14A-ACY1A0A1B0GW23 586 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 DENND3A2RUS2 1198 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 ENPP3O14638 875 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 TBCAO75347 108 aaKnown RBP8.68□□□□□ -1.02
CDC42-201ENST00000315554 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 FAM13AO94988 1023 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 EDN1P05305 212 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 IDEP14735 1019 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 ATP2A2P16615 1042 aaKnown RBP8.68□□□□□ -1.02
CDC42-201ENST00000315554 SFPQP23246 707 aaKnown RBP eCLIP8.68□□□□□ -1.024e-7■■■■■ 30.9
CDC42-201ENST00000315554 AFMP43652 599 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 NPTX2P47972 431 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 CDC42EP1Q00587 391 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
CDC42-201ENST00000315554 SRGAP1Q7Z6B7 1085 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 MYCT1Q8N699 235 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 IQUBQ8NA54 791 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 USP38Q8NB14 1042 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 RNF169Q8NCN4 708 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 MRPS27Q92552 414 aaKnown RBP8.68□□□□□ -1.02
CDC42-201ENST00000315554 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 DDX12PQ92771 950 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 APBB2Q92870 758 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 DRC1Q96MC2 740 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 BLZF1Q9H2G9 400 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 KMT5AQ9NQR1 393 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 TBC1D7Q9P0N9 293 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
CDC42-201ENST00000315554 SQORQ9Y6N5 450 aa8.68□□□□□ -1.02
CDC42-201ENST00000315554 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 A0A1W2PQD8 194 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 ACTN4O43707 911 aaKnown RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 TSPAN1O60635 241 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 ERLIN2O94905 339 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 AMHP03971 560 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 PRKCBP05771 671 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 PLS3P13797 630 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 ZSCAN20P17040 1043 aaPredicted RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 NMT1P30419 496 aaKnown RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 SYKP43405 635 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 NAMPTP43490 491 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 GATMP50440 423 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 DMP1Q13316 513 aaPredicted RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 DSC3Q14574 896 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 PPP2R5AQ15172 486 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 AMHR2Q16671 573 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 ODR4Q5SWX8 454 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 CDCA2Q69YH5 1023 aaPredicted RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 TWF2Q6IBS0 349 aaKnown RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 SFR1Q86XK3 245 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 ZBTB8OSQ8IWT0 167 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 DNAJC19Q96DA6 116 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 HPSEQ9Y251 543 aa8.67□□□□□ -1.02
CDC42-201ENST00000315554 YBX2Q9Y2T7 364 aaKnown RBP8.67□□□□□ -1.02
CDC42-201ENST00000315554 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.66□□□□□ -1.02
CDC42-201ENST00000315554 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.66□□□□□ -1.02
CDC42-201ENST00000315554 K7ENM7 598 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 GFRA3O60609 400 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 PPP1R37O75864 691 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
CDC42-201ENST00000315554 ASIC1P78348 528 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 CUL4BQ13620 913 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 TAS1R3Q7RTX0 852 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 HERC6Q8IVU3 1022 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 CEP57L1Q8IYX8 460 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 LPPQ93052 612 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 HPS3Q969F9 1004 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 PAGE5Q96GU1 130 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 SLC9A7Q96T83 725 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 TIPINQ9BVW5 301 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 FTHL17Q9BXU8 183 aa8.66□□□□□ -1.02
CDC42-201ENST00000315554 EIF2AQ9BY44 585 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms