RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 C8orf33Q9H7E9 229 aaPredicted RBP6.52□□□□□ -1.37
ZNF440-201ENST00000304060 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
ZNF440-201ENST00000304060 CDH7Q9ULB5 785 aa6.52□□□□□ -1.37
ZNF440-201ENST00000304060 KCNH3Q9ULD8 1083 aa6.52□□□□□ -1.37
ZNF440-201ENST00000304060 IRAK3Q9Y616 596 aa6.52□□□□□ -1.37
ZNF440-201ENST00000304060 PHLPP2Q6ZVD8 1323 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 PIK3CDO00329 1044 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 FGF19O95750 216 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ADRB1P08588 477 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 MARCKSP29966 332 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SPRED2Q7Z698 418 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SRGAP1Q7Z6B7 1085 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ORC3Q9UBD5 711 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ZMYM5Q9UJ78 669 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 TPCN1Q9ULQ1 816 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 FOCADQ5VW36 1801 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 A0A0U1RQF3 1178 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 C2CD2LO14523 706 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 KRT32Q14532 448 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 XKR3Q5GH77 459 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 DEPDC1BQ8WUY9 529 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 LOXL4Q96JB6 756 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 MKNK1Q9BUB5 465 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SLC2A4RGQ9NR83 387 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 EPS15L1Q9UBC2 864 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 PRG3Q9Y2Y8 225 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 MICAL3Q7RTP6 2002 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.371e-6■■■■■ 66.8
ZNF440-201ENST00000304060 COL4A6Q14031 1691 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 PRRG1O14668 218 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ZNF263O14978 683 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ATXN1P54253 815 aaKnown RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ADCY1Q08828 1119 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SLC44A4Q53GD3 710 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 RABEPKQ7Z6M1 372 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 C12orf76Q8N812 135 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ENAHQ8N8S7 591 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 HERC2P3Q9BVR0 1158 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 RIOX1Q9H6W3 641 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 AGO3Q9H9G7 860 aaKnown RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 ZFP14Q9HCL3 533 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 SEPT9Q9UHD8 586 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 TECTAO75443 2155 aa6.51□□□□□ -1.37
ZNF440-201ENST00000304060 COL11A1P12107 1806 aaPredicted RBP6.51□□□□□ -1.37
ZNF440-201ENST00000304060 DCDC2BA2VCK2 349 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PDGFBP01127 241 aaPredicted RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SOD2P04179 222 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 FGFR1P11362 822 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 MGAT3Q09327 533 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 FAM102BQ5T8I3 360 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TPRG1Q6ZUI0 275 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 S1PR5Q9H228 398 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PARP2Q9UGN5 583 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PCDHB9Q9Y5E1 797 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SIPA1L1O43166 1804 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 CPLX1O14810 134 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 GLULP15104 373 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PTGS1P23219 599 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 HOXC8P31273 242 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 NOVP48745 357 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 YARSP54577 528 aaKnown RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 CYP4A11Q02928 519 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 NR1H3Q13133 447 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 CC2D1AQ6P1N0 951 aaPredicted RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TRAF7Q6Q0C0 670 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SKAP1Q86WV1 359 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 HDDC3Q8N4P3 179 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TRMT61BQ9BVS5 477 aaKnown RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 ANO3Q9BYT9 981 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PRKD2Q9BZL6 878 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 NDRG2Q9UN36 371 aaKnown RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TNNQ9UQP3 1299 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TRIM66O15016 1216 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 XPOTO43592 962 aaKnown RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 CLSTN1O94985 981 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 GLP2RO95838 553 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SDSP20132 328 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 VEPH1Q14D04 833 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 E2F5Q15329 346 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 UVSSAQ2YD98 709 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 RNF43Q68DV7 783 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 NOTUMQ6P988 496 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 ZNF512Q96ME7 567 aaPredicted RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 PPP1R16BQ96T49 567 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 COL20A1Q9P218 1284 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 UBIAD1Q9Y5Z9 338 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
ZNF440-201ENST00000304060 SIP14410 1827 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 H0Y626 953 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 TRIM16O95361 564 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 EPCAMP16422 314 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 RFC5P40937 340 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 FAM189BP81408 668 aa6.5□□□□□ -1.37
ZNF440-201ENST00000304060 NOLC1Q14978 699 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms