RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 P2RX5Q93086 422 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ESRRAP11474 423 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 NR5A1Q13285 461 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 GRK7Q8WTQ7 553 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 SLC40A1Q9NP59 571 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ATP1A1P05023 1023 aaKnown RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 SCP2P22307 547 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 CCDC14Q49A88 953 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 FAM26FQ5R3K3 315 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ZBTB10Q96DT7 871 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 DHTKD1Q96HY7 919 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 SMARCAD1Q9H4L7 1026 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 DISC1Q9NRI5 854 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PLCH1Q4KWH8 1693 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 IPO5O00410 1097 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 DSG3P32926 999 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 RWDD2BP57060 319 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 CRYMQ14894 314 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 TMED2Q15363 201 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 POMGNT1Q8WZA1 660 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 ZBTB24O43167 697 aaPredicted RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PHBP35232 272 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 OAZ1P54368 228 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 SURF1Q15526 300 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 ECT2Q9H8V3 914 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 GGPS1O95749 300 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 LMNAP02545 664 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 MYL1P05976 194 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 SEC24CP53992 1094 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PSMC5P62195 406 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 ESRRGP62508 458 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 CCDC89Q8N998 374 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 RDH13Q8NBN7 331 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 ZNF711Q9Y462 761 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 NFKBIEO00221 500 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 PTPRAP18433 802 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 LSP1P33241 339 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 SP3Q02447 781 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 DGKDQ16760 1214 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 NMRK2Q9NPI5 230 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
NPC1L1-201ENST00000289547 CDC25AP30304 524 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 PDCD2Q16342 344 aaPredicted RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 MAN2A1Q16706 1144 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 GEN1Q17RS7 908 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 GRAMD1BQ3KR37 738 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 NLRP4Q96MN2 994 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 LCMT1Q9UIC8 334 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 ACTN1P12814 892 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 MESDQ14696 234 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 NME8Q8N427 588 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SEPT1Q8WYJ6 367 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 PAGE5Q96GU1 130 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 WNK4Q96J92 1243 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 LRRC1Q9BTT6 524 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 SPATC1LQ9H0A9 340 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 MLXIPLQ9NP71 852 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 CA12O43570 354 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 KPNA6O60684 536 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 DCUN1D2Q6PH85 259 aa12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
NPC1L1-201ENST00000289547 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms