RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
PRPF6-201ENST00000266079 PCDHA10Q9Y5I2 948 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 MAFGO15525 162 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
PRPF6-201ENST00000266079 STAM2O75886 525 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
PRPF6-201ENST00000266079 MRPS25P82663 173 aaKnown RBP13.72□□□□□ -0.21
PRPF6-201ENST00000266079 KRT76Q01546 638 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 TRIM32Q13049 653 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 NLRP14Q86W24 1093 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 CCT8L2Q96SF2 557 aa13.72□□□□□ -0.21
PRPF6-201ENST00000266079 ADCY6O43306 1168 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 KRT14P02533 472 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 CNGA1P29973 690 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 RGS2P41220 211 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 MATR3P43243 847 aaKnown RBP eCLIP13.71□□□□□ -0.21
PRPF6-201ENST00000266079 VAV2P52735 878 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 CFAP58Q5T655 872 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 DDX12PQ92771 950 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
PRPF6-201ENST00000266079 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 SLC5A4Q9NY91 659 aa13.71□□□□□ -0.21
PRPF6-201ENST00000266079 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.22
PRPF6-201ENST00000266079 TACC1O75410 805 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 QARSP47897 775 aaKnown RBP13.71□□□□□ -0.22
PRPF6-201ENST00000266079 CDR1P51861 262 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 IFT88Q13099 833 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.22
PRPF6-201ENST00000266079 SCFD2Q8WU76 684 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 TSGA10Q9BZW7 698 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 GDAQ9Y2T3 454 aa13.71□□□□□ -0.22
PRPF6-201ENST00000266079 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 ZNF862O60290 1169 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 KIF22Q14807 665 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 GLG1Q92896 1179 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 RSPH10B2B2RC85 870 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 GPR25O00155 361 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 FAM107AO95990 144 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 RPN1P04843 607 aaKnown RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 RSPH10BP0C881 870 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 NR1D1P20393 614 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 ICAM3P32942 547 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 PRCPP42785 496 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
PRPF6-201ENST00000266079 TTYH3Q9C0H2 523 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 STK17AQ9UEE5 414 aa13.7□□□□□ -0.22
PRPF6-201ENST00000266079 PLXNA1Q9UIW2 1896 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 CLSTN1O94985 981 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SMPD1P17405 629 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 TCP1P17987 556 aaKnown RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 MDH1P40925 334 aaKnown RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 DNM2P50570 870 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SEC24CP53992 1094 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SOX10P56693 466 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 CCDC62Q6P9F0 684 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 CD302Q8IX05 232 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 ZNF296Q8WUU4 475 aaPredicted RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 TRIB2Q92519 343 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 OSBPL9Q96SU4 736 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 APBA2Q99767 749 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 PYM1Q9BRP8 204 aaKnown RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 DYNC1LI2O43237 492 aaPredicted RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 JAK3P52333 1124 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 ZBED6P86452 979 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SNCBQ16143 134 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 ABHD16BQ9H3Z7 469 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SEPT9Q9UHD8 586 aaPredicted RBP13.69□□□□□ -0.22
PRPF6-201ENST00000266079 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
PRPF6-201ENST00000266079 PSAPP07602 524 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms