RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 UBXN11Q5T124 520 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 RAD9AQ99638 391 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 BLZF1Q9H2G9 400 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 C17orf75Q9HAS0 396 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 LARSQ9P2J5 1176 aaKnown RBP16.04■□□□□ 0.16
MSR1-201ENST00000262101 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
MSR1-201ENST00000262101 XIRP2A4UGR9 3374 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 ACTN4O43707 911 aaKnown RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 DGKIO75912 1065 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 PRKCBP05771 671 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 IDEP14735 1019 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 ATF7P17544 494 aaPredicted RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 NMT1P30419 496 aaKnown RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 LPPQ93052 612 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 TIFAQ96CG3 184 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 YME1L1Q96TA2 773 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 C2orf40Q9H1Z8 148 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 TTYH1Q9H313 450 aaPredicted RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 CERS4Q9HA82 394 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 HES2Q9Y543 173 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 REV3LO60673 3130 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 A0A1B0GUA9 196 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 ACKR2O00590 384 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 TRAK2O60296 914 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 SYKP43405 635 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 HTRA4P83105 476 aaPredicted RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 HPS3Q969F9 1004 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 TNMDQ9H2S6 317 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 PRMT7Q9NVM4 692 aaPredicted RBP16.03■□□□□ 0.16
MSR1-201ENST00000262101 DACT1Q9NYF0 836 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 MSRAQ9UJ68 235 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 INSL6Q9Y581 213 aa16.03■□□□□ 0.16
MSR1-201ENST00000262101 FAM237AA0A1B0GTK4 181 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.16
MSR1-201ENST00000262101 SLFN14P0C7P3 912 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 EFNA5P52803 228 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 SMTNP53814 917 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
MSR1-201ENST00000262101 CUL4BQ13620 913 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 FAM187BQ17R55 369 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.16
MSR1-201ENST00000262101 HAUS6Q7Z4H7 955 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 ZNF598Q86UK7 904 aaKnown RBP16.02■□□□□ 0.16
MSR1-201ENST00000262101 SFR1Q86XK3 245 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 ZNF689Q96CS4 500 aaPredicted RBP16.02■□□□□ 0.16
MSR1-201ENST00000262101 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 CUEDC2Q9H467 287 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
MSR1-201ENST00000262101 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 ZNF202O95125 648 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 NCKAP1LP55160 1127 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 PAN2Q504Q3 1202 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 EEF1DP3Q658K8 133 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 GBF1Q92538 1859 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 FGFBP2Q9BYJ0 223 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 IKZF4Q9H2S9 585 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 SLC28A3Q9HAS3 691 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 MYO9BQ13459 2157 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 PCBP1Q15365 356 aaKnown RBP eCLIP16.01■□□□□ 0.15
MSR1-201ENST00000262101 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 FAM178BQ8IXR5 827 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 TRAIPQ9BWF2 469 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 TMEM134Q9H6X4 195 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 HCSTQ9UBK5 93 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 SPTBN5Q9NRC6 3674 aaKnown RBP16.01■□□□□ 0.15
MSR1-201ENST00000262101 TRANK1O15050 2925 aa16.01■□□□□ 0.15
MSR1-201ENST00000262101 STAG3L1P0CL83 205 aa16■□□□□ 0.15
MSR1-201ENST00000262101 AXLP30530 894 aa16■□□□□ 0.15
MSR1-201ENST00000262101 CASP5P51878 434 aa16■□□□□ 0.15
MSR1-201ENST00000262101 TAP1Q03518 808 aa16■□□□□ 0.15
MSR1-201ENST00000262101 SNW1Q13573 536 aaKnown RBP16■□□□□ 0.15
MSR1-201ENST00000262101 RAB30Q15771 203 aa16■□□□□ 0.15
MSR1-201ENST00000262101 TMEM132AQ24JP5 1023 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms