RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 ATP2A3Q93084 1043 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 CABS1Q96KC9 395 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 APEX2Q9UBZ4 518 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 RSPH10B2B2RC85 870 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 CYP26A1O43174 497 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 RSPH10BP0C881 870 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 SLC9A1P19634 815 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 DR1Q01658 176 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 TRIP13Q15645 432 aaPredicted RBP18.26■□□□□ 0.51
ACTN4-201ENST00000252699 CCDC13Q8IYE1 715 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 IRX2Q9BZI1 471 aaPredicted RBP18.26■□□□□ 0.51
ACTN4-201ENST00000252699 UBE4BO95155 1302 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 BUB1BO60566 1050 aaPredicted RBP18.26■□□□□ 0.51
ACTN4-201ENST00000252699 DHX9Q08211 1270 aaKnown RBP18.26■□□□□ 0.51
ACTN4-201ENST00000252699 KCTD16Q68DU8 428 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
ACTN4-201ENST00000252699 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 ANAPC5Q9UJX4 755 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 STK33Q9BYT3 514 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 ERAP1Q9NZ08 941 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 NCK2O43639 380 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 FAM71BQ8TC56 605 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 MKNK1Q9BUB5 465 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 NUP85Q9BW27 656 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 ATP8B3O60423 1300 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 WDR72Q3MJ13 1102 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 DARS2Q6PI48 645 aaKnown RBP18.25■□□□□ 0.51
ACTN4-201ENST00000252699 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 OATP04181 439 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 GYPCP04921 128 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 CLCN6P51797 869 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 EVX2Q03828 476 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 SAMD3Q8N6K7 520 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
ACTN4-201ENST00000252699 ATP8B1O43520 1251 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 PPFIA4O75335 1185 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 GNGT1P63211 74 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 Q4G0T1 1027 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 GPC2Q8N158 579 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 STRIP2Q9ULQ0 834 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 HBP1O60381 514 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-201ENST00000252699 CYP2W1Q8TAV3 490 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 WDR24Q96S15 920 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 AGPAT1Q99943 283 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 PIN4Q9Y237 131 aaKnown RBP18.24■□□□□ 0.51
ACTN4-201ENST00000252699 GTF2A2P52657 109 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 BASP1P80723 227 aaKnown RBP18.24■□□□□ 0.51
ACTN4-201ENST00000252699 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 KIFC3Q9BVG8 833 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 FHOD1Q9Y613 1164 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 SSU72P8A0A1W2PR75 194 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 POC1B-GALNT4F8VUJ3 575 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 M0QYV0 167 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 PGK2P07205 417 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 RFFLQ8WZ73 363 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 OSBPL9Q96SU4 736 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
ACTN4-201ENST00000252699 SYNGAP1Q96PV0 1343 aa18.24■□□□□ 0.51
ACTN4-201ENST00000252699 SLC18A3Q16572 532 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 HEMGNQ9BXL5 484 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 KCNJ6P48051 423 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 IER5Q5VY09 327 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 I3L4J1 428 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 LAMC2Q13753 1193 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 RAD9BQ6WBX8 426 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 HSPH1Q92598 858 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 FUCA2Q9BTY2 467 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 AGPAT3Q9NRZ7 376 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 PRKAG2Q9UGJ0 569 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 PACSIN2Q9UNF0 486 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 ASAP2O43150 1006 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 PSMC1P62191 440 aaKnown RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 ZNF211Q13398 564 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-201ENST00000252699 KYAT1Q16773 422 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 EFCAB12Q6NXP0 572 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 FBXO38Q6PIJ6 1188 aa18.23■□□□□ 0.51
ACTN4-201ENST00000252699 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 TTC39CQ8N584 583 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 FMO2Q99518 471 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 ABCB6Q9NP58 842 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 CYP26B1Q9NR63 512 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 PXMP2Q9NR77 195 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 KLK7P49862 253 aa18.22■□□□□ 0.51
ACTN4-201ENST00000252699 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms