RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MEIS3P2A8K0S8 358 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 CPLX1O14810 134 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 B4GALT3O60512 393 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 ZNF623O75123 536 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 SRGAP2BP0DMP2 458 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 SFPQP23246 707 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS50-201ENST00000251739 TECP42680 631 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 BCAR1P56945 870 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 PSMC5P62195 406 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
VPS50-201ENST00000251739 INF2Q27J81 1249 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 PLA2G4FQ68DD2 849 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 MRPL43Q8N983 215 aaKnown RBP11.57□□□□□ -0.56
VPS50-201ENST00000251739 RNF169Q8NCN4 708 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 BCL7CQ8WUZ0 217 aaPredicted RBP11.57□□□□□ -0.56
VPS50-201ENST00000251739 ASIC4Q96FT7 647 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 SCLT1Q96NL6 688 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 ZBP1Q9H171 429 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 IFT122Q9HBG6 1241 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 WRAP73Q9P2S5 460 aaPredicted RBP11.57□□□□□ -0.56
VPS50-201ENST00000251739 DDX25Q9UHL0 483 aaKnown RBP11.57□□□□□ -0.56
VPS50-201ENST00000251739 CDH22Q9UJ99 828 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 HCFC2Q9Y5Z7 792 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 ADGRG1Q9Y653 693 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 PLXNA3P51805 1871 aa11.57□□□□□ -0.56
VPS50-201ENST00000251739 DOCK8Q8NF50 2099 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 C3orf80F5H4A9 247 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
VPS50-201ENST00000251739 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
VPS50-201ENST00000251739 DNM2P50570 870 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 RAB27AP51159 221 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 KRT17Q04695 432 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 SCRN1Q12765 414 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 PTPN21Q16825 1174 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 LLGL2Q6P1M3 1020 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 TMC7Q7Z402 723 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 KSR1Q8IVT5 923 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 PRSS33Q8NF86 280 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 HAS1Q92839 578 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 CASP10Q92851 521 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 LPPQ93052 612 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 TATDN2Q93075 761 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 FAM20AQ96MK3 541 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 VN1R3Q9BXE9 311 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 DHX33Q9H6R0 707 aaKnown RBP11.56□□□□□ -0.56
VPS50-201ENST00000251739 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 TBC1D13Q9NVG8 400 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 SUCLA2Q9P2R7 463 aaPredicted RBP11.56□□□□□ -0.56
VPS50-201ENST00000251739 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 PIN4Q9Y237 131 aaKnown RBP11.56□□□□□ -0.56
VPS50-201ENST00000251739 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 FAM186AA6NE01 2351 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 CFAP54Q96N23 3096 aa11.56□□□□□ -0.56
VPS50-201ENST00000251739 GVINP1Q7Z2Y8 2422 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 MTCL1Q9Y4B5 1905 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 CARNS1A5YM72 827 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 TBX3O15119 743 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 QARSP47897 775 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 MRE11P49959 708 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 POLGP54098 1239 aaPredicted RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 NPEPPSP55786 919 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 STK3Q13188 491 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 TWF2Q6IBS0 349 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 CPLX2Q6PUV4 134 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 ALYREFQ86V81 257 aaKnown RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 FBXL6Q8N531 539 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 PBXIP1Q96AQ6 731 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 TMEM169Q96HH4 297 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 IGSF21Q96ID5 467 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 JPH2Q9BR39 696 aaPredicted RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 INO80BQ9C086 356 aaPredicted RBP11.55□□□□□ -0.56
VPS50-201ENST00000251739 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 GJB4Q9NTQ9 266 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 COL4A3BPQ9Y5P4 624 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 VPS13AQ96RL7 3174 aa11.55□□□□□ -0.56
VPS50-201ENST00000251739 INPPL1O15357 1258 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 PFKFB2O60825 505 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 ZC3H11AO75152 810 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS50-201ENST00000251739 OFD1O75665 1012 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 CDKL5O76039 1030 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 GALTP07902 379 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 CTSAP10619 480 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 SKIP12755 728 aa11.54□□□□□ -0.56
VPS50-201ENST00000251739 HOXA11P31270 313 aaPredicted RBP11.54□□□□□ -0.56
VPS50-201ENST00000251739 ALDH7A1P49419 539 aaKnown RBP11.54□□□□□ -0.56
VPS50-201ENST00000251739 ITIH3Q06033 890 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms