RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 CTNNBL1Q8WYA6 563 aaPredicted RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 ITGA4P13612 1032 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 ICE2Q659A1 982 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 LMBRD2Q68DH5 695 aaPredicted RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 VSIG10LQ86VR7 867 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 USP38Q8NB14 1042 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 DDX47Q9H0S4 455 aaKnown RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 KMT5AQ9NQR1 393 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
LRFN1-201ENST00000248668 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
LRFN1-201ENST00000248668 AGPSO00116 658 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 ATMINO43313 823 aaPredicted RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 KRT76Q01546 638 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 DNAJC21Q5F1R6 531 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 ZNF214Q9UL59 606 aaPredicted RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 COPB2P35606 906 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 JAK3P52333 1124 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 ITIH3Q06033 890 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 DDX42Q86XP3 938 aaKnown RBP eCLIP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 CLSTN1O94985 981 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 CNGA1P29973 690 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 GTF2BQ00403 316 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 ZNF211Q13398 564 aaPredicted RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 SNRNP35Q16560 246 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 IFI16Q16666 785 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 FOXR1Q6PIV2 292 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 SRLQ86TD4 932 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 CCDC60Q8IWA6 550 aaPredicted RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 BICD1Q96G01 975 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
LRFN1-201ENST00000248668 NOC2LQ9Y3T9 749 aaKnown RBP17.06■□□□□ 0.32
LRFN1-201ENST00000248668 LMNB1P20700 586 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 CETN1Q12798 172 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 TMEM161BQ8NDZ6 487 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 CASKIN2Q8WXE0 1202 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 SEMA4DQ92854 862 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 NENFQ9UMX5 172 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 ADGRA3Q8IWK6 1321 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 SGPL1O95470 568 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 SMTNP53814 917 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 HLTFQ14527 1009 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRFN1-201ENST00000248668 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
LRFN1-201ENST00000248668 POMGNT1Q8WZA1 660 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 CYP26A1O43174 497 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 DSG3P32926 999 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 LLGL1Q15334 1064 aa17.05■□□□□ 0.32
LRFN1-201ENST00000248668 NSUN6Q8TEA1 469 aaKnown RBP17.05■□□□□ 0.32
LRFN1-201ENST00000248668 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
LRFN1-201ENST00000248668 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
LRFN1-201ENST00000248668 EPHB4P54760 987 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 SEPT14Q6ZU15 432 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 NT5DC3Q86UY8 548 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 DHX38Q92620 1227 aaKnown RBP17.04■□□□□ 0.32
LRFN1-201ENST00000248668 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 MED4Q9NPJ6 270 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 COG5Q9UP83 839 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 PFASO15067 1338 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 KRIT1O00522 736 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 KCNA2P16389 499 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 EEPD1Q7L9B9 569 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 IFT20Q8IY31 132 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 EXOC4Q96A65 974 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 RABEP2Q9H5N1 569 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 VIPAS39Q9H9C1 493 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 JPH1Q9HDC5 661 aaPredicted RBP17.04■□□□□ 0.32
LRFN1-201ENST00000248668 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
LRFN1-201ENST00000248668 FZD9O00144 591 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 LYPLA2O95372 231 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 FTLP02792 175 aaPredicted RBP17.03■□□□□ 0.32
LRFN1-201ENST00000248668 SFNP31947 248 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 PRKCEQ02156 737 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 GHRHRQ02643 423 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 AADACL2Q6P093 401 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 TRIM31Q9BZY9 425 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 CTTNBP2NLQ9P2B4 639 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 RNF14Q9UBS8 474 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 BTNL10A8MVZ5 291 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 TNNC1P63316 161 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 TAS1R2Q8TE23 839 aa17.03■□□□□ 0.32
LRFN1-201ENST00000248668 RFFLQ8WZ73 363 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms