RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 DMP1Q13316 513 aaPredicted RBP15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 MAPK6Q16659 721 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 TWF2Q6IBS0 349 aaKnown RBP15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 NPAS4Q8IUM7 802 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 TMEM161BQ8NDZ6 487 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 FIZ1Q96SL8 496 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 EIF2AQ9BY44 585 aaKnown RBP15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 RNF19AQ9NV58 838 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 ARHGAP28Q9P2N2 729 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 PCDHB7Q9Y5E2 793 aa15.88■□□□□ 0.13
SUPT4H1-201ENST00000225504 MEIS3P2A8K0S8 358 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 ACKR2O00590 384 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 SLFN14P0C7P3 912 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 FGFR1P11362 822 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 NMT1P30419 496 aaKnown RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 AFMP43652 599 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 RAB30Q15771 203 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 EEF1DP3Q658K8 133 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 Q7L0L9 218 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZNF598Q86UK7 904 aaKnown RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 LPPQ93052 612 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 TIFAQ96CG3 184 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZNF689Q96CS4 500 aaPredicted RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 BLZF1Q9H2G9 400 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 TMEM134Q9H6X4 195 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 PARVGQ9HBI0 331 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 DACT1Q9NYF0 836 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 LARSQ9P2J5 1176 aaKnown RBP15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 LRFN2Q9ULH4 789 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 INSL6Q9Y581 213 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 PCDHB2Q9Y5E7 798 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 CHD9Q3L8U1 2897 aa15.87■□□□□ 0.13
SUPT4H1-201ENST00000225504 COL4A6Q14031 1691 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 A0A1B0GUA9 196 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TRAK2O60296 914 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 IDEP14735 1019 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 SYKP43405 635 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 NCKAP1LP55160 1127 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TAP1Q03518 808 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 PRPF4BQ13523 1007 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 FAM43BQ6ZT52 329 aaPredicted RBP15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 HAUS6Q7Z4H7 955 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 SFR1Q86XK3 245 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 MRPS27Q92552 414 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 PAGE5Q96GU1 130 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 FAM161BQ96MY7 647 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TRIM9Q9C026 710 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TNMDQ9H2S6 317 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TMEM161AQ9NX61 479 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 HES2Q9Y543 173 aa15.86■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZNF623O75123 536 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 TBCAO75347 108 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 STAG3L1P0CL83 205 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 MAPTP10636 758 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 AXLP30530 894 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 SMTNP53814 917 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 NCBP1Q09161 790 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 CUL4BQ13620 913 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 PCBP1Q15365 356 aaKnown RBP eCLIP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 PAN2Q504Q3 1202 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 NOTUMQ6P988 496 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 MRPL10Q7Z7H8 261 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 SMG8Q8ND04 991 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 HPS3Q969F9 1004 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 FGFBP2Q9BYJ0 223 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 PDZD7Q9H5P4 517 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 ELAC1Q9H777 363 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 CERS4Q9HA82 394 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 SLC28A3Q9HAS3 691 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 PANK4Q9NVE7 773 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 CNTNAP2Q9UHC6 1331 aa15.85■□□□□ 0.13
SUPT4H1-201ENST00000225504 NPTXRO95502 500 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 EOMESO95936 686 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 HERC4Q5GLZ8 1057 aaPredicted RBP15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 CLLU1OSQ5K130 101 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZBTB45Q96K62 511 aaPredicted RBP15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 PRIMPOLQ96LW4 560 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 TARS2Q9BW92 718 aaKnown RBP15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 IKZF4Q9H2S9 585 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 ZNF576Q9H609 170 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 HCSTQ9UBK5 93 aa15.84■□□□□ 0.13
SUPT4H1-201ENST00000225504 SZT2Q5T011 3432 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms