RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 KDM4CQ9H3R0 1056 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 KDM3AQ9Y4C1 1321 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 PTENP60484 403 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ATP11AP98196 1134 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 MYL7Q01449 175 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 NFIAQ12857 509 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
CTDP1-201ENST00000075430 GSTA5Q7RTV2 222 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ATXN2LQ8WWM7 1075 aaKnown RBP18■□□□□ 0.47
CTDP1-201ENST00000075430 HES6Q96HZ4 224 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 CDC42EP4Q9H3Q1 356 aaKnown RBP18■□□□□ 0.47
CTDP1-201ENST00000075430 RIOX1Q9H6W3 641 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 HOMER3Q9NSC5 361 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 USP15Q9Y4E8 981 aaPredicted RBP18■□□□□ 0.47
CTDP1-201ENST00000075430 MGRN1O60291 552 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 PDE6CP51160 858 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 EIF3BP55884 814 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 NCALDP61601 193 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 ZNF543Q08ER8 600 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 C6orf118Q5T5N4 469 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 DUPD1Q68J44 220 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 CAPRIN2Q6IMN6 1127 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 ZDHHC24Q6UX98 284 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 INTS8Q75QN2 995 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 LONP2Q86WA8 852 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 DDX4Q9NQI0 724 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 HAO1Q9UJM8 370 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 RPTORQ8N122 1335 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 FAM86B1E9PN63 330 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 ZBTB5O15062 677 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 CYP26A1O43174 497 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 SORBS3O60504 671 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 FAM86B2P0C5J1 330 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 KRT5P13647 590 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 FMO5P49326 533 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 KLRC3Q07444 240 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 WLSQ5T9L3 541 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 THEMIS2Q5TEJ8 643 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 CCDC174Q6PII3 467 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 TAOK1Q7L7X3 1001 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 C4orf33Q8N1A6 199 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 HAUS1Q96CS2 278 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 TRIM7Q9C029 511 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 INTS2Q9H0H0 1204 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 C15orf41Q9Y2V0 281 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 PCDHA2Q9Y5H9 948 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 UTRNP46939 3433 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 PPFIA2O75334 1257 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 TTLL1O95922 423 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 PSMC2P35998 433 aaKnown RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 SGO2Q562F6 1265 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 FITM2Q8N6M3 262 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 ZNF526Q8TF50 670 aaPredicted RBP17.99■□□□□ 0.47
CTDP1-201ENST00000075430 ZNF653Q96CK0 615 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 DYDC2Q96IM9 177 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 EPB41L4BQ9H329 900 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 SIX2Q9NPC8 291 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 KLHL14Q9P2G3 628 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
CTDP1-201ENST00000075430 DDX3YO15523 660 aaKnown RBP17.98■□□□□ 0.47
CTDP1-201ENST00000075430 LMNB1P20700 586 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 SLC12A3P55017 1021 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 CNGA2Q16280 664 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 FRMD5Q7Z6J6 570 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 ATP6V0A4Q9HBG4 840 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 SLCO1B3Q9NPD5 702 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 DCTN4Q9UJW0 460 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 ASTN1O14525 1302 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 GOLGA8SH3BPF8 625 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 GOLGA8MH3BSY2 632 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 RIPK2O43353 540 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 SNX3O60493 162 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 SYCP2LQ5T4T6 812 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 BZW1Q7L1Q6 419 aaKnown RBP17.98■□□□□ 0.47
CTDP1-201ENST00000075430 ZFPM1Q8IX07 1006 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
CTDP1-201ENST00000075430 NKIRAS1Q9NYS0 192 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 PFASO15067 1338 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 KIF1CO43896 1103 aaKnown RBP17.98■□□□□ 0.47
CTDP1-201ENST00000075430 SGPL1O95470 568 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 ZNF131P52739 623 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 TLCD1Q96CP7 247 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 ERP27Q96DN0 273 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 FAXDC2Q96IV6 333 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 NAP1L3Q99457 506 aaPredicted RBP17.98■□□□□ 0.47
CTDP1-201ENST00000075430 CASZ1Q86V15 1759 aa17.98■□□□□ 0.47
CTDP1-201ENST00000075430 EMSYQ7Z589 1322 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 TMEM150BA6NC51 233 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 PPEF1O14829 653 aaPredicted RBP17.97■□□□□ 0.47
CTDP1-201ENST00000075430 CLGNO14967 610 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 RARAP10276 462 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 KRT15P19012 456 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 KRT17Q04695 432 aa17.97■□□□□ 0.47
CTDP1-201ENST00000075430 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
CTDP1-201ENST00000075430 SPATA21Q7Z572 469 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms