RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
USH1C-201ENST00000005226 XRCC4Q13426 336 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 ACCSLQ4AC99 568 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 TAX1BP1Q86VP1 789 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 AGAP1Q9UPQ3 857 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 FAM187AA6NFU0 413 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 CCDC169A6NNP5 214 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 DDX39AO00148 427 aaKnown RBP15.13■□□□□ 0.01
USH1C-201ENST00000005226 TBX3O15119 743 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 PHF2O75151 1096 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 SGPL1O95470 568 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 CALCAP01258 141 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 ICA1Q05084 483 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 MOXD1Q6UVY6 613 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 OTOP1Q7RTM1 612 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 CCDC105Q8IYK2 499 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 NGLY1Q96IV0 654 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 POLR3CQ9BUI4 534 aaPredicted RBP15.13■□□□□ 0.01
USH1C-201ENST00000005226 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
USH1C-201ENST00000005226 GLT8D2Q9H1C3 349 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 GYS1P13807 737 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 ADCY1Q08828 1119 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 SNX1Q13596 522 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 LRCH2Q5VUJ6 765 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 PIGWQ7Z7B1 504 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 LMO3Q8TAP4 145 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 PGM2Q96G03 612 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 ADAMTSL1Q8N6G6 1762 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 EMSYQ7Z589 1322 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 IGLV3-22A0A075B6J6 115 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 ACSL3O95573 720 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 GAP43P17677 238 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 PPP3CAQ08209 521 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
USH1C-201ENST00000005226 NEDD9Q14511 834 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 PHLDB2Q86SQ0 1253 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 DCAF4Q8WV16 495 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
USH1C-201ENST00000005226 PCDHA3Q9Y5H8 950 aa15.12■□□□□ 0.01
USH1C-201ENST00000005226 RARAP10276 462 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 SCP2P22307 547 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 NF2P35240 595 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 DHX34Q14147 1143 aaKnown RBP15.11■□□□□ 0.01
USH1C-201ENST00000005226 TRIP13Q15645 432 aaPredicted RBP15.11■□□□□ 0.01
USH1C-201ENST00000005226 WLSQ5T9L3 541 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 C1orf54Q8WWF1 131 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 PWWP2AQ96N64 755 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 NOD2Q9HC29 1040 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 CTNNAL1Q9UBT7 734 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 L3MBTL1Q9Y468 752 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 RASGRF2O14827 1237 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 RIPK2O43353 540 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 MGRN1O60291 552 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 DNAJC8O75937 253 aaPredicted RBP15.11■□□□□ 0.01
USH1C-201ENST00000005226 ATP6V1G2O95670 118 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 ELF1P32519 619 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 PEX5P50542 639 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 BFSP1Q12934 665 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 EXOC3L1Q86VI1 746 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 CCDC63Q8NA47 563 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 TEKT1Q969V4 418 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 DMAC2Q9NW81 257 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 RASAL2Q9UJF2 1139 aa15.11■□□□□ 0.01
USH1C-201ENST00000005226 G3V3G9 751 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CRKP46108 304 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 KCNJ2P63252 427 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 KIF22Q14807 665 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CNGA2Q16280 664 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 ARMC9Q7Z3E5 817 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 ANKS4BQ8N8V4 417 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 ANKRD42Q8N9B4 389 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 MKL1Q969V6 931 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 SAMD15Q9P1V8 674 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 DIS3Q9Y2L1 958 aaKnown RBP15.1■□□□□ 0.01
USH1C-201ENST00000005226 A0A1W2PRG0 241 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 PPEF1O14829 653 aaPredicted RBP15.1■□□□□ 0.01
USH1C-201ENST00000005226 EIF3DO15371 548 aaKnown RBP eCLIP15.1■□□□□ 0.01
USH1C-201ENST00000005226 SLC26A4O43511 780 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 ARP10275 920 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CHRNA3P32297 505 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CIITAP33076 1130 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms