RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 MYLK2Q9H1R3 596 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 CNOT10Q9H9A5 744 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 NOVA2Q9UNW9 492 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SGSM2O43147 1006 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SYTL3Q4VX76 610 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 KRT73Q86Y46 540 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 CCDC60Q8IWA6 550 aaPredicted RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SPRTNQ9H040 489 aaPredicted RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SYNCRIPO60506 623 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 TRIM13O60858 407 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 MDH1BQ5I0G3 518 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 FAF2Q96CS3 445 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 DHX36Q9H2U1 1008 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 MAP4P27816 1152 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 NNTQ13423 1086 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 FEN1P39748 380 aaKnown RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ATP5JP18859 108 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ARL3P36405 182 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 RGS5O15539 181 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 SOAT1P35610 550 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 HSPA2P54652 639 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 CUL4AQ13619 759 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 SEPT2Q15019 361 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 FAM129BQ96TA1 746 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 GYS1P13807 737 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ALDH18A1P54886 795 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 RCN1Q15293 331 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 TTC8Q8TAM2 541 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 DCDC2Q9UHG0 476 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 PPP2R3BQ9Y5P8 575 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 K7ERI5 159 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 CSNK2BP67870 215 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 TNFAIP2Q03169 654 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 LRRC8BQ6P9F7 803 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 OMA1Q96E52 524 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 PBKQ96KB5 322 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 RASSF9O75901 435 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 DARSP14868 501 aaKnown RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 KCNA2P16389 499 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 RXRBP28702 533 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 CENPUQ71F23 418 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 ARHGEF25Q86VW2 580 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
HS3ST1-201ENST00000002596 LDHAP00338 332 aaKnown RBP13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 MFN1Q8IWA4 741 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 IQCF2Q8IXL9 164 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 KRT78Q8N1N4 520 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 OR6B2Q6IFH4 312 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 RPRD1BQ9NQG5 326 aaKnown RBP13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 V9GYQ6 96 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 ZNF555Q8NEP9 628 aa13.1□□□□□ -0.31
HS3ST1-201ENST00000002596 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms