RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Snx27Q3UHD6 539 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Dlg4Q62108 724 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Actn1Q7TPR4 892 aaKnown RBP23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Cwf19l2Q8BG79 887 aaKnown RBP23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Cdk17Q8K0D0 523 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Matr3Q8K310 846 aaKnown RBP23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Maged1Q9QYH6 775 aaKnown RBP23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Arih1Q9Z1K5 555 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Wnt7bP28047 349 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Nat8lQ3UGX3 299 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Arrdc3Q7TPQ9 414 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Elac2Q80Y81 831 aaKnown RBP23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Slc9a9Q8BZ00 644 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Rtfdc1Q99K95 307 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 1700020D05RikQ99PB1 294 aa23.02■■□□□ 1.28
Ccdc88a-202ENSMUST00000109477 Gm43951A0A0N4SUT6 962 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Vmn2r63E9Q0K5 859 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Gm9268E9Q0M3 861 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Vmn2r62K7N712 859 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Slc3a2P10852 526 aaKnown RBP23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 RarbP22605 482 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ano9P86044 747 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mgat3Q10470 538 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mphosph8Q3TYA6 858 aaKnown RBP23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Styk1Q6J9G1 429 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Maip1Q8BHE8 291 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Grik4Q8BMF5 956 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Usp20Q8C6M1 916 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Arl8aQ8VEH3 186 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 PrameQ9D4Z5 464 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mettl7bQ9DD20 244 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Cdc42ep5Q9Z0X0 150 aa23.01■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Taf1Q80UV9 1891 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 1700016G14RikA0A286YCZ6 238 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Sptlc1O35704 473 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Scp2P32020 547 aaKnown RBP23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ly6dP35459 127 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mfsd14aP70187 490 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Six2Q62232 296 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 HomezQ80W88 542 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Phtf2Q8CB19 747 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Bicdl2Q8CHW5 507 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ago2Q8CJG0 860 aaKnown RBP23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Phldb2Q8K1N2 1249 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Abcb6Q9DC29 842 aa23■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Gm42715A0A087WP63 3095 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Odf2A3KGV1 830 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Gm28042B7ZCM9 1014 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tmem131O70472 1877 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 PtprcP06800 1291 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Serpinc1P32261 465 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Pola2P33611 600 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tmod1P49813 359 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ppp3caP63328 521 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 PrkcbP68404 671 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tbx3P70324 741 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Acot6Q32Q92 419 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Dpcr1Q3TNW5 500 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 WhrnQ80VW5 918 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ankfy1Q810B6 1169 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mettl24Q8CCB5 363 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Fam217aQ9D9W6 419 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Fmnl1Q9JL26 1094 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Frat1P70339 274 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 rp9P97762 213 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Cyp2c29Q64458 490 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Celf6Q7TN33 460 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Eif4bQ8BGD9 611 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Trmt13Q8BYH3 481 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Calhm6Q8C9E8 313 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Vmn1r191Q8K4D0 298 aa22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Nol7Q9D7Z3 254 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Xrn2Q9DBR1 951 aaKnown RBP22.99■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 LctF8VPT3 1931 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Rnaseh1O70338 285 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Carmil2Q3V3V9 1296 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Klra6Q60653 266 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Crhr2Q60748 411 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Oit3Q8R4V5 546 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Serpina9Q9D7D2 418 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Rilpl1Q9JJC6 406 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 JmyQ9QXM1 983 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Hs6st3Q9QYK4 470 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Akt3Q9WUA6 479 aa22.98■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Scgb2b11A0A087WR49 112 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 PtenO08586 403 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Guca2bO09051 106 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Slc6a20bO88575 635 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ptgs1P22437 602 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Nfe2Q07279 373 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Fscn1Q61553 493 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ube2q1Q7TSS2 422 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Pcdhgc5Q91XW9 944 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mageb16Q9CWV4 363 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Mzb1Q9D8I1 188 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Cse1lQ9ERK4 971 aaKnown RBP22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Usp29Q9ES63 869 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Tlr2Q9QUN7 784 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Wdr81Q5ND34 1934 aa22.97■■□□□ 1.27
Ccdc88a-202ENSMUST00000109477 Ralgapa2A3KGS3 1872 aa22.97■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms