RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Pcdhb12Q91Y07 789 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 CrebzfQ91ZR3 358 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mcrs1Q99L90 462 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Q9D1F3 157 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mrvi1Q9WUX5 899 aaKnown RBP12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Cul4bA2A432 970 aaKnown RBP12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Cdc25aP48964 514 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Oas1fQ14AZ4 364 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Prss55Q14BX2 321 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Pnpla5Q32LZ8 432 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rufy4Q3TYX8 563 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 KhsrpQ3U0V1 748 aaKnown RBP12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nol12Q8BG17 217 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Bnc2Q8BMQ3 1127 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Pnma1Q8C1C8 353 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Slc25a38Q91XD8 326 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Phf6Q9D4J7 364 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Dnajb4Q9D832 337 aa12.15□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tatdn2B7ZNL9 783 aaKnown RBP12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 9630041A04RikD3Z3U4 205 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Pcdha4O88689 947 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ppp3ccP48455 513 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ppp2r5cQ60996 524 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Mtss1lQ6P9S0 715 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rnf168Q80XJ2 565 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Asnsd1Q8BFS9 627 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tti2Q8BGV4 512 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 PolrmtQ8BKF1 1207 aaKnown RBP12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Dnaaf2Q8BPI1 814 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Pi15Q8BS03 258 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Kank2Q8BX02 843 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Sucla2Q9Z2I9 463 aa12.14□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm7356A0A087WSA6 508 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 4932429P05RikA2ADI4 785 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Mcpt2P15119 244 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Lsp1P19973 330 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Drp2Q05AA6 957 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tfdp1Q08639 410 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Edem3Q2HXL6 931 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Hexim2Q3TVI4 313 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Git1Q68FF6 770 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gucd1Q8BZI6 239 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 MiosQ8VE19 875 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tmem30aQ8VEK0 364 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ccnt1Q9QWV9 724 aaKnown RBP12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nek4Q9Z1J2 792 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Psma5Q9Z2U1 241 aaKnown RBP12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Veph1A1A535 833 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 BC049352E9Q2Z6 85 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Map7O88735 730 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Hoxd8P23463 289 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 March5Q3KNM2 278 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Spdye4aQ5IBH6 268 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Mkrn3Q60764 544 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Pwwp2aQ69Z61 730 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Casd1Q7TN73 797 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Jakmip1Q8BVL9 626 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Olfr532Q8VGT4 309 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rab13Q9DD03 202 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Fgf22Q9ESS2 162 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Stk25Q9Z2W1 426 aa12.13□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Esr2O08537 530 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Cd70O55237 195 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tnni3P48787 211 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Casp7P97864 303 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rgs9bpQ148R9 237 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Sp9Q64HY3 484 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rftn1Q6A0D4 554 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Mrgprb8Q7TN51 330 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Sgsm2Q80U12 1005 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Arid5bQ8BM75 1188 aaKnown RBP12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Trim47Q8C0E3 641 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 RabepkQ8VCH5 380 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Adgre4Q91ZE5 689 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ndufaf7Q9CWG8 436 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Vps13aQ5H8C4 3166 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ttc3O88196 1979 aaKnown RBP12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tnfrsf4P47741 272 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CiitaP79621 1155 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Cplx2P84086 134 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Slc26a2Q62273 739 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Trak2Q6P9N8 913 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Lrrn2Q6PHP6 730 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Adamtsl4Q80T21 1036 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nemp2Q8CB65 421 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tpcn1Q9EQJ0 817 aa12.12□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Zscan4-ps2A0A1C7CYU6 506 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Grik3B1AS29 919 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Axin2O88566 840 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 EnahQ03173 802 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Col9a2Q07643 688 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Itpripl2Q3UV16 535 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Dph1Q5NCQ5 438 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Bcar1Q61140 874 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Epha7Q61772 998 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nudt16Q6P3D0 195 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Slc17a8Q8BFU8 601 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ranbp6Q8BIV3 1105 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 GancQ8BVW0 898 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Robo4Q8C310 1012 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms