RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Zkscan1Q8BGS3 561 aaKnown RBP13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 FtoQ8BGW1 502 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Znf473Q8BI67 892 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Rsl1d1Q8BVY0 452 aaKnown RBP13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gpc3Q8CFZ4 579 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 FgbQ8K0E8 481 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 E2f4Q8R0K9 410 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Tada3Q8R0L9 432 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Rsph1Q8VIG3 301 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 VillQ91YD6 859 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pls3Q99K51 630 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pdzd3Q99MJ6 498 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ppp1r3gQ9CW07 347 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Sgpp1Q9JI99 430 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 B4galt5Q9JMK0 388 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Egfl7Q9QXT5 275 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Plcb1Q9Z1B3 1216 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Sept3Q9Z1S5 350 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Krt85Q9Z2T6 507 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 PtproE9Q612 1226 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Serpinb3aG3X9V8 387 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Casq1O09165 405 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 AurkbO70126 345 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Samsn1P57725 372 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pla2g5P97391 137 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cpa2Q504N0 417 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Has1Q61647 583 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 PtprcapQ64697 197 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pcdhb14Q6PB90 796 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Olfr538Q7TRT5 310 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Map3k11Q80XI6 850 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Elac2Q80Y81 831 aaKnown RBP13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 AarsQ8BGQ7 968 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Zc3h6Q8BYK8 1177 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Defb36Q8K3U4 67 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Krt79Q8VED5 531 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Olfr390Q8VEZ7 311 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Iqca1Q9CUL5 857 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 TheglQ9DA15 459 aa13.39□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gm13084A2A8N0 494 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 1700001O22RikA2APZ1 375 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Catsper2A2ARP9 588 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Kcnt2D3Z649 1135 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Camk4P08414 469 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 CcnoP0C242 352 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Aimp1P31230 310 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Kcnj6P48542 425 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Aff3P51827 1254 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Epb41l4aP52963 686 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Sptlc2P97363 560 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ctnnb1Q02248 781 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Tnfaip8l3Q3TBL6 204 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Vwa2Q70UZ7 791 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mrgprb8Q7TN51 330 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Olfr119Q7TRJ5 321 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 CyldQ80TQ2 952 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Metap1Q8BP48 386 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Eif2b5Q8CHW4 717 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Slc14a1Q8VHL0 384 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Tnpo2Q99LG2 887 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Susd3Q9D176 269 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Rp1P56716 2095 aa13.38□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pex10B1AUE5 324 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ap1b1O35643 943 aaKnown RBP13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Epb41l2O70318 988 aaKnown RBP13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Grem1O70326 184 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Yme1l1O88967 715 aaKnown RBP13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cyp11b2P15539 500 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Kcnn2P58390 839 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 PrkcbP68404 671 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Serpina1eQ00898 413 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Arhgef16Q3U5C8 713 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cd180Q62192 661 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Kiaa1841Q68FF0 718 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Dzip3Q7TPV2 1204 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 R3hcc1Q8BSI6 488 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ushbp1Q8R370 680 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 BrdtQ91Y44 956 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Vps16Q920Q4 839 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Igdcc4Q9EQS9 1252 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Fgf22Q9ESS2 162 aa13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Noa1Q9JJG9 693 aaKnown RBP13.37□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 EomesO54839 707 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Fgf18O89101 207 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Tal1P22091 329 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Usp10P52479 792 aaKnown RBP13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gtf2bP62915 316 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 GaltQ03249 379 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Nsun7Q14AW5 724 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 DeptorQ570Y9 409 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Usp28Q5I043 1051 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Znf235Q61116 645 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Prpf4bQ61136 1007 aaKnown RBP13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cyp3a11Q64459 504 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Rftn2Q8CHX7 500 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Lrrc66Q8K0B3 872 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mtmr3Q8K296 1196 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Kri1Q8VDQ9 704 aaKnown RBP13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ccdc71Q8VEG0 433 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mob2Q8VI63 235 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms