RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Lrig2Q52KR2 1054 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Tsr1Q5SWD9 803 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 P4ha1Q60715 534 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Rufy1Q8BIJ7 712 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gjd4Q8BSD4 364 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Asic2Q925H0 512 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 4931423N10RikQ9D4J9 382 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 PycardQ9EPB4 193 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Hyou1Q9JKR6 999 aaKnown RBP12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gimap9G3X987 291 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Stat4P42228 749 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Rps12P63323 132 aaKnown RBP12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 NyxP83503 476 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Rbm46P86049 533 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Acot6Q32Q92 419 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 FntaQ61239 377 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Slain1Q68FF7 579 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 NfrkbQ6PIJ4 1296 aaKnown RBP12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Wdr35Q8BND3 1181 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Btbd7Q8CFE5 1130 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Kdm4bQ91VY5 1086 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Card14Q99KF0 999 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Mxra8Q9DBV4 442 aa12.24□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cntnap2Q9CPW0 1332 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Sbf2E9PXF8 1872 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Slc6a16A0A1L1SR47 742 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Skint3A7TZF0 458 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Kcnu1O54982 1121 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Fgl2P12804 432 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gna15P30678 374 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Erbb2P70424 1256 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cdr2P97817 455 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Ccdc160Q3UYG1 323 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 4933427I04RikQ3V053 235 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cnot7Q60809 285 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Stip1Q60864 543 aaKnown RBP12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Btnl9Q8BJE2 536 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Naa25Q8BWZ3 972 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Spdl1Q923A2 608 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Ccdc163A2AGD7 326 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Eif3dO70194 548 aaKnown RBP12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cyp11b2P15539 500 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Hoxd10P28359 340 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cst8P32766 142 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Rufy4Q3TYX8 563 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Muc3aQ3U5A2 218 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Tspyl3Q3UYP3 334 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Sec24bQ80ZX0 1251 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Vps52Q8C754 723 aaKnown RBP12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Fam20aQ8CID3 541 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Rhobtb2Q91V93 728 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Pcdhb12Q91Y07 789 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Lrrc57Q9D1G5 239 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Extl3Q9WVL6 918 aa12.23□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpina1aP07758 413 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpina1bP22599 413 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Sstr3P30935 428 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Map4k1P70218 827 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpina1cQ00896 412 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpina1dQ00897 413 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gpr139Q80UC8 345 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Nrde2Q80XC6 1172 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gemin8Q8BHE1 238 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Trmt6Q8CE96 497 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Slc12a8Q8VI23 705 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Nxf1Q99JX7 618 aaKnown RBP12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 YwhabQ9CQV8 246 aaKnown RBP12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Golph3Q9CRA5 298 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Adgrf5G5E8Q8 1348 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Pdia2D3Z6P0 527 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpinb8O08800 374 aaKnown RBP12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Guca2bO09051 106 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Opa1P58281 960 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Ppp1r13bQ62415 1087 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Arl13bQ640N2 427 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gpd2Q64521 727 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Fhod1Q6P9Q4 1197 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Garem2Q6PAJ3 880 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Raver2Q7TPD6 673 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Slc17a8Q8BFU8 601 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Bola2Q8BGS2 86 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gbp9Q8BTS3 619 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Tbl3Q8C4J7 801 aaKnown RBP12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Lrrc17Q9CXD9 443 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Serpinb3bQ9D1Q5 387 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Sertad2Q9JJG5 309 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 B3galt4Q9Z0F0 371 aa12.22□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Foxn2E9Q7L6 429 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 TazI7HJS2 263 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gm10436L7N1Y3 520 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 L1camP11627 1260 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Senp1P59110 640 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Gjb6P70689 261 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Map3k9Q3U1V8 1077 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Six2Q62232 296 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Zbtb7bQ64321 544 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Sestd1Q80UK0 696 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cct8l1Q80YT3 562 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Prl7b1Q8CGZ9 251 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Reep2Q8VCD6 254 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms