RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Sdr42e1Q9D665 394 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc182Q9D9C6 152 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rnf103Q9R1W3 683 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Grk1Q9WVL4 564 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lrrc74aA0A1Y7VMD6 494 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 GcP21614 476 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pik3r1P26450 724 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lrrn4P59383 733 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Shox2P70390 331 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tbc1d1Q60949 1255 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Fbxo28Q8BIG4 368 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lmo3Q8BZL8 145 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Efl1Q8C0D5 1127 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mrgprx1Q8CIP3 322 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gtf2ird1Q9JI57 1104 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rfwd2Q9R1A8 733 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cyp2ab1S4R196 498 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cntnap2Q9CPW0 1332 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gm4907B1AXB9 411 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Serpinb8O08800 374 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Krt8P11679 490 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Adcy7P51829 1099 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mtus1Q5HZI1 1210 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Sp4Q62445 782 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 L3mbtl3Q8BLB7 883 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Abcf3Q8K268 709 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Bst2Q8R2Q8 172 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Anapc4Q91W96 807 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Synpo2Q91YE8 1087 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Xab2Q9DCD2 855 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tacc3Q9JJ11 631 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Snx1Q9WV80 522 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nfs1Q9Z1J3 459 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Prl6a1O35257 230 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cyp11b2P15539 500 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Krt19P19001 403 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ddr1Q03146 911 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 R3hdm4Q4VBF2 262 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Atp13a3Q5XF89 1219 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Swap70Q6A028 585 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Slc7a6osQ7TPE5 306 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mageb18Q8BQR7 327 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Kirrel3Q8BR86 778 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Zhx2Q8C0C0 836 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Q8C6G1 249 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 C130026I21RikQ8C898 291 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Sugp2Q8CH09 1067 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Q8VDP2 222 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc65Q8VHI7 493 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 CrygnQ8VHL5 183 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nudt12Q9DCN1 462 aa10.53□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cep85lA0A1W2P884 806 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gm45837F7D3W5 961 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 MyocO70624 490 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Tp53P02340 387 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 CatspereP0DP43 985 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Syt2P46097 422 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 AaasP58742 546 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 LxnP70202 222 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ctc1Q5SUQ9 1212 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Elf1Q60775 612 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ppp2r5aQ6PD03 486 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 GmipQ6PGG2 971 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gpr101Q80T62 511 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kctd6Q8BNL5 237 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 PaoxQ8C0L6 504 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ints9Q8K114 658 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gprc5cQ8K3J9 440 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Fkbp6Q91XW8 327 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gmcl1Q920G9 524 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Pde2aQ922S4 916 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Asb11Q9CQ31 323 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Extl2Q9ES89 330 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Tlr5Q9JLF7 859 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Adam22Q9R1V6 904 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Znf394Q9Z1D9 521 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Slc6a16A0A1L1SR47 742 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Serpinb6eI7HJI3 429 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 InhbeO08717 350 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Msh2P43247 935 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Rnf113a2Q14B01 337 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Cyp11b1Q3TG86 501 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Wdr41Q3UDP0 460 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Zcchc2Q69ZB8 1166 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Retreg2Q6NS82 541 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Prl2b1Q9DAZ2 228 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ftsj3Q9DBE9 838 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ifi202Q9R002 445 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Col11a2Q64739 1736 aa10.52□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Fyb2A2A995 729 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Znf804aA2AKY4 1200 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 4930523C07RikE9Q2T4 99 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 4933406M09RikG3XA12 479 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Xrcc5P27641 732 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 GalcP54818 684 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 4930502E18RikQ14BQ3 236 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Mtcl1Q3UHU5 1945 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Vwa3aQ3UVV9 1148 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Serpinb1cQ5SV42 375 aa10.51□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ltbp1Q8CG19 1712 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms