RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 Cd68P31996 326 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Scp2P32020 547 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Cplx1P63040 134 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Tfdp1Q08639 410 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Edem3Q2HXL6 931 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 P4ha1Q60715 534 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Dmc1Q61880 340 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Armcx2Q6A058 784 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Krba1Q6NXZ1 1043 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Hook2Q7TMK6 716 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 1700010I14RikQ7TPG0 532 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 RtknQ8C6B2 564 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Vps52Q8C754 723 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gpc3Q8CFZ4 579 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Evc2Q8K1G2 1220 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Stxbp5Q8K400 1152 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Fam129bQ8R1F1 749 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Atp6v0a4Q920R6 833 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Mmtag2Q99LX5 260 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Atp13a1Q9EPE9 1200 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Trhr2Q9ERT2 382 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Akr1a1Q9JII6 325 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Cacng4Q9JJV4 327 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Homer2Q9QWW1 354 aa10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Nup210Q9QY81 1886 aaKnown RBP10.42□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Ccdc173A0JLY1 547 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Krt36B1AQ75 473 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Psmc3O88685 442 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Tal1P22091 329 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Nrp1P97333 923 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 LyarQ08288 388 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 March5Q3KNM2 278 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gtf2f1Q3THK3 508 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Zbtb8osQ505B7 168 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 E2f8Q58FA4 860 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 EfsQ64355 560 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 PtprjQ64455 1238 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Exoc3Q6KAR6 755 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Frat2Q8K025 231 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Calhm5Q8R100 309 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Tspyl4Q8VD63 406 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Trub2Q91WG3 331 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Spdl1Q923A2 608 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 NenfQ9CQ45 171 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 ZwintQ9CQU5 252 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Smc1aQ9CU62 1233 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Rab13Q9DD03 202 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gde1Q9JL56 331 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 TfebQ9R210 475 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Stxbp4Q9WV89 557 aa10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Fxr2Q9WVR4 673 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Top3bQ9Z321 862 aaKnown RBP10.41□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Tnrc18Q80WC3 2878 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Myo5aQ99104 1853 aaKnown RBP10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Igkv17-121A0A0G2JFA8 117 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gm10093D3YYI8 482 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 2010300C02RikE9Q3M9 1175 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gm5134E9QAB5 671 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Gm11236J3QMS7 360 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Hdac1O09106 482 aaKnown RBP10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Clcn6O35454 870 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 PdgfbP31240 241 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Dpep1P31428 410 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Asprv1Q09PK2 339 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Trappc10Q3TLI0 1259 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Fam117bQ3U3E2 584 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Capn13Q3UW68 665 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Ddx19aQ61655 478 aaKnown RBP10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Cd180Q62192 661 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Smarca1Q6PGB8 1046 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Rad9bQ6WBX7 403 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Dzip3Q7TPV2 1204 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Tmc3Q7TQ69 1130 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Slc17a8Q8BFU8 601 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Nod1Q8BHB0 953 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Btnl9Q8BJE2 536 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Ddx19bQ8BZY3 494 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Stoml1Q8CI66 399 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Olfr390Q8VEZ7 311 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Slc12a9Q99MR3 914 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Dhx30Q99PU8 1217 aaKnown RBP10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Snrnp35Q9D384 244 aa10.4□□□□□ -0.74
Tpm1-203ENSMUST00000050905 Cyp26c1B2RXA7 518 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Mdm4O35618 489 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Grem1O70326 184 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Vti1aO89116 217 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Surf1P09925 306 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Gp1bbP56400 206 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Setd4P58467 439 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Tmc5Q32NZ6 967 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 ItgaeQ60677 1167 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Mtss1lQ6P9S0 715 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Pnma2Q8BHK0 365 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 SheQ8BSD5 492 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 GancQ8BVW0 898 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Cstf2tQ8C7E9 632 aaKnown RBP10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 FgbQ8K0E8 481 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Cd2bp2Q9CWK3 342 aaKnown RBP10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 MajinQ9D992 256 aa10.39□□□□□ -0.75
Tpm1-203ENSMUST00000050905 Nmnat1Q9EPA7 285 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms