RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Castor1Q9CWQ8 331 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Mapre1Q61166 268 aaKnown RBP17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Plekha4Q8VC98 588 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ino80bQ99PT3 375 aaKnown RBP17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 ParvaQ9EPC1 372 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ext2P70428 718 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 4930444G20RikD3Z741 495 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Akr1b1P45376 316 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Atp1b3P97370 278 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Dmc1Q61880 340 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Sin3bQ62141 1098 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 MarsQ68FL6 902 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Naa30Q8CES0 364 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Q8CEZ4 452 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 4930469K13RikA0A286YDB2 92 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rbbp7Q60973 425 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 FtoQ8BGW1 502 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Frmd4aQ8BIE6 1020 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kcna1P16388 495 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gnl1P36916 607 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 InscQ3HNM7 579 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Msi2Q920Q6 346 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 NvlQ9DBY8 855 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 H2afyQ9QZQ8 372 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ifit3bE9PV48 403 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 TwistnbQ78WZ7 330 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lsp1P19973 330 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ptgs2Q05769 604 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trpm8Q8R4D5 1104 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Taf11Q99JX1 211 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Abca8aQ8K442 1620 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm4869A0A1B0GSG7 984 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kcnma1Q08460 1209 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Akap4Q60662 849 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lrrc41Q8K1C9 807 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Mtss1Q8R1S4 759 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rassf7Q9DD19 359 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cul4aQ3TCH7 759 aa17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ddx18Q8K363 660 aaKnown RBP17.53■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 PRAG1Q571I4 1179 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Orc2Q60862 576 aaKnown RBP17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Krr1Q8BGA5 380 aaKnown RBP17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Klhl2Q8JZP3 593 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Art3Q8R2G4 371 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 CrotQ9DC50 612 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Vmn2r71L7N2D8 855 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Pou5f1P20263 352 aaKnown RBP17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Usp10P52479 792 aaKnown RBP17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Deup1Q7M6Y5 601 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tmem63cQ8CBX0 802 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cstf3Q99LI7 717 aaKnown RBP17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cbx8Q9QXV1 362 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Erbb3Q61526 1339 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kcnh2O35219 1162 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Pald1P70261 859 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 FntaQ61239 377 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Moxd2Q7TT41 619 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccz1Q8C1Y8 480 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lmbrd1Q8K0B2 537 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cul3Q9JLV5 768 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Chek2Q9Z265 546 aa17.52■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Klc2O88448 599 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sash1P59808 1230 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cyp7b1Q60991 507 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ireb2Q811J3 963 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 MajinQ9D992 256 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PodxlQ9R0M4 503 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Kiaa0391Q8JZY4 584 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Abt1Q9QYL7 269 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Il1rapl1P59823 695 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 HltfQ6PCN7 1003 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pdia6Q922R8 440 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Hic2Q9JLZ6 619 aaKnown RBP17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Plcg1Q62077 1302 aa17.52■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ttc30a2A2AKQ8 664 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tmc5Q32NZ6 967 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pdp2Q504M2 532 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Xlr3cQ61806 226 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Calhm6Q8C9E8 313 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ttc30a1Q99J38 664 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ttc30bQ9CY00 664 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Deaf1Q9Z1T5 566 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Orm2P07361 207 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Nek1P51954 1203 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Mageb18Q8BQR7 327 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Klhl28Q9CR40 571 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gpr182P43142 395 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tlk1Q8C0V0 766 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 NclnQ8VCM8 563 aaKnown RBP17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ddah1Q9CWS0 285 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 C1dO35473 141 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Q8BP99 230 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PawrQ925B0 333 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tmed10Q9D1D4 219 aaKnown RBP17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Fam92bQ3V2J0 292 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Wdr19Q3UGF1 1341 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pfkfb3A7UAK5 555 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Kcnb1Q03717 857 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Armc6Q8BNU0 468 aa17.51■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PigsQ6PD26 555 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms