RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Bzw1Q9CQC6 419 aaKnown RBP12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Grtp1Q9D3N8 359 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sec14l1A8Y5H7 715 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fam71aB7XG49 585 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 AfpP02772 605 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nsun2Q1HFZ0 757 aaKnown RBP12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ppm1kQ8BXN7 372 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Btbd6Q8K2J9 488 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Mageb16Q9CWV4 363 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Trmt44Q9D2Q2 713 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Trappc11B2RXC1 1133 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lilrb3P97484 841 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Col6a1Q04857 1025 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc84Q4VA36 332 aaKnown RBP12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Grm4Q68EF4 912 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Kat5Q8CHK4 513 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pdzd4Q9QY39 772 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 C5P06684 1680 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm3182K7N6T8 263 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Orc4O88708 433 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pstpip1P97814 415 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc169Q8BXX9 214 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Arhgap24Q8C4V1 747 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cse1lQ9ERK4 971 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Slc13a1Q9JHI4 594 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Myh6Q02566 1938 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Magea10A2AMW4 325 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Patl2A2ARM1 529 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm5926E9PWJ8 236 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 SftpbP50405 377 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Drp2Q05AA6 957 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tom1l2Q5SRX1 507 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tdpoz4Q6YCH2 370 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Q8BGD0 127 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Clec4gQ8BNX1 294 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nxf1Q99JX7 618 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cd2bp2Q9CWK3 342 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ddx24Q9ESV0 857 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Adam22Q9R1V6 904 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Hebp1Q9R257 190 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 ClgnP52194 611 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sema3eP70275 775 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nap1l4Q78ZA7 375 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Mrgprx1Q8CIP3 322 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cpne8Q9DC53 577 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Map3k15A2AQW0 1331 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nfat5Q9WV30 1534 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Itpripl1A2ASA8 547 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ttc17E9PVB5 1198 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 GzmgP13366 248 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Psen1P49769 467 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tlr8P58682 1032 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gcnt1Q09324 428 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gbp8Q2V6D6 525 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 MgarpQ8VI64 283 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Slc5a4bQ91ZP4 660 aa12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ptdss1Q99LH2 473 aaKnown RBP12.1□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm13023A2A8N2 498 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Znf804aA2AKY4 1200 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccng1P51945 294 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Smad1P70340 465 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dnajc8Q6NZB0 253 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pls3Q99K51 630 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Hdac9Q99N13 588 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc88cQ6VGS5 2009 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Marcksl1P28667 200 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Stx2Q00262 289 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tfe3Q64092 572 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gga2Q6P5E6 603 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 NcaldQ91X97 193 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rbm31yQ9D3U4 565 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Zfp212G3X8R7 492 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nedd9O35177 833 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rasa2P58069 847 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cdca2Q14B71 982 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 WaplQ65Z40 1200 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ssxb5Q6XAS2 159 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 DcakdQ8BHC4 231 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sgk1Q9WVC6 431 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm4758L7N258 96 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Eps15P42567 897 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 NsfP46460 744 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cyp2e1Q05421 493 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 KhsrpQ3U0V1 748 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rsad1Q5SUV1 442 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rnaseh2bQ80ZV0 308 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sugp2Q8CH09 1067 aa12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Spats2lQ91WJ7 558 aaKnown RBP12.09□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dynlt1P51807 113 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Vav2Q60992 868 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atp2b4Q6Q477 1205 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Znf365Q8BG89 408 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 N4bp3Q8C7U1 537 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 CntrobQ8CB62 887 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 HemgnQ9ERZ0 503 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Arhgap33Q80YF9 1305 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tet3Q8BG87 1668 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Slfn8B1ARD8 910 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zfp275G3X904 499 aa12.08□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pja1O55176 578 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms