RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ttc30a1Q99J38 664 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cuedc2Q9CXX9 284 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Eif2ak3Q9Z2B5 1114 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 CcnyQ8BGU5 341 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Wdr27Q8C5V5 780 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Kiaa0391Q8JZY4 584 aaKnown RBP10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ipo11Q8K2V6 975 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Scrn2Q8VCA8 425 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tgm5Q9D7I9 724 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gid8Q9D7M1 228 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Map3k15A2AQW0 1331 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Akr1b7P21300 316 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Xlr3cQ61806 226 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ScocQ78YZ6 125 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ThtpaQ8JZL3 224 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ddx20Q9JJY4 825 aaKnown RBP10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Atp6v1g2Q9WTT4 118 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Iqcj-Schip1A0A088MLT8 559 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Schip1P0DPB4 484 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Col6a1Q04857 1025 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam193bQ3U2K0 892 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trpc1Q61056 793 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lamc2Q61092 1191 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Phactr3Q8BYK5 558 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Inpp5fQ8CDA1 1132 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ParvaQ9EPC1 372 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm4841E9QAA8 417 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ulk3Q3U3Q1 472 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ScinQ60604 715 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Caprin1Q60865 707 aaKnown RBP10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ccdc154Q6RUT8 657 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tigd4Q8BUZ3 513 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pcdha5Q91Y15 934 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trim66Q924W6 1242 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm28036V9GXJ1 658 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 NppbP40753 121 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Psmc1P62192 440 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Odr4Q4PJX1 447 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cnot7Q60809 285 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Glra4Q61603 456 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Znf148Q61624 794 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 HiraQ61666 1015 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Krt32Q62168 407 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nlrp9bQ66X22 1003 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Churc1Q6DG52 112 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PolrmtQ8BKF1 1207 aaKnown RBP10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Prpf31Q8CCF0 499 aaKnown RBP10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mgea5Q9EQQ9 916 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 CpdO89001 1377 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Oip5A2AQ14 241 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 ClmnQ8C5W0 1052 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Uts2Q9QZQ3 123 aa10.75□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sdccag3A2AIW0 432 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cylc2B1AWN8 422 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Jdp2P97875 163 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trmt1Q3TX08 663 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ddx31Q6NZQ2 687 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 HnrnprQ8VHM5 632 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rnf14Q9JI90 485 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Adam22Q9R1V6 904 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fyb2A2A995 729 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gspt2Q149F3 632 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Acot6Q32Q92 419 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nlrp4eQ66X19 978 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tspyl5Q69ZB3 406 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lca5Q80ST9 704 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 SnphQ80U23 495 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Stam2O88811 523 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm4981Q3ULJ8 291 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 E330034G19RikQ3UWX6 351 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Axdnd1Q3UZ57 424 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Hspa1aQ61696 641 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trim36Q80WG7 729 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Yars2Q8BYL4 472 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dcun1d2Q8BZJ7 259 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Znrd1-asQ8R0E5 213 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Taf12Q8VE65 161 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 CbsQ91WT9 561 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gtf2iQ9ESZ8 998 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Zbtb18Q9WUK6 522 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3187M0QWW3 260 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Alox15P39654 663 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tbx2Q60707 711 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rbm15bQ6PHZ5 887 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Rccd1Q8BTU7 377 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Actl9Q8CG27 415 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 CopaQ8CIE6 1224 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Slc18a1Q8R090 521 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 HmcesQ8R1M0 353 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Stx19Q8R1Q0 292 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Hdac11Q91WA3 347 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam129cD3YZB0 591 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ripply1Q2WG77 201 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Q3KNL4 93 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 WhammQ571B6 793 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm4952Q5FW57 296 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sptlc3Q8BG54 563 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Snrnp27Q8K194 155 aa10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Vwa5aQ99KC8 793 aaKnown RBP10.74□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Spag6Q9JLI7 507 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms