RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Spats2lQ91WJ7 558 aaKnown RBP13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Fgfr1op2Q9CRA9 253 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Dip2bQ3UH60 1574 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gm13023A2A8N2 498 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Eif3dO70194 548 aaKnown RBP13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ap1g2O88512 791 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Stam2O88811 523 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Hsph1Q61699 858 aaKnown RBP13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ces5aQ6AW46 575 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Palm2Q8BR92 376 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Dpp9Q8BVG4 862 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Klra17Q9JMA4 273 aa13.08□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cdc42bpbQ7TT50 1713 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Rps6kc1Q8BLK9 1056 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Slc38a7Q8BWH0 463 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Bag5Q8CI32 447 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Taco1Q8K0Z7 294 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Arfip2Q8K221 341 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ipo11Q8K2V6 975 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Rnf14Q9JI90 485 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gm3371F7CQW8 167 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 StrnO55106 780 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Krt86P97861 486 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cfap52Q5F201 620 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 HiraQ61666 1015 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Atl2Q6PA06 583 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mmgt1Q8K273 131 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Fkbp6Q91XW8 327 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pdcd7Q9WTY1 482 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Apol11bE9PUZ0 337 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Zfp212G3X8R7 492 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Nmt1O70310 496 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cops2P61202 443 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Fam89aQ14BJ1 175 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pid1Q3UBG2 217 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Dclk2Q6PGN3 756 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Smg5Q6ZPY2 1017 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tsen34Q8BMZ5 316 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Wdr35Q8BND3 1181 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gpc5Q8CAL5 572 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Vps39Q8R5L3 886 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Basp1Q91XV3 226 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 DtnaQ9D2N4 746 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pold3Q9EQ28 462 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Nme9A0A1L1SUL6 329 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gm382B1AXN3 1250 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 L1camP11627 1260 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 UrosP51163 265 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tubgcp3P58854 905 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Yipf3Q3UDR8 347 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 P2rx5Q3UYI1 455 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ppp4r4Q8C0Y0 875 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pnma1Q8C1C8 353 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Unc45bQ8CGY6 931 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Lman1lQ8VCD3 505 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tlcd1Q99JT6 247 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 YwhabQ9CQV8 246 aaKnown RBP13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ttc33Q9D6K7 262 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Rabgef1Q9JM13 491 aa13.07□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gm36028A0A0U1RPM1 299 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Wdr36Q3TAQ9 899 aaKnown RBP13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tatdn3Q3U1C6 294 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Psen2Q61144 448 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 TbataQ7TSD4 393 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ush1gQ80T11 461 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Adcy2Q80TL1 1090 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Nmrk1Q91W63 195 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Trex1Q91XB0 314 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Akt1s1Q9D1F4 257 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Trip6Q9Z1Y4 480 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Foxd4Q60688 444 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Hspbp1Q99P31 357 aaKnown RBP13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 RnmtQ9D0L8 465 aaKnown RBP13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tube1Q9D6T1 475 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ccdc22Q9JIG7 627 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Prex1Q69ZK0 1650 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tcp11x2A2AEI7 503 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Top3aO70157 1003 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Slc2a13Q3UHK1 637 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Dpf2Q61103 391 aaKnown RBP13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Dsg1aQ61495 1057 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Usp49Q6P9L4 685 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ces1fQ91WU0 561 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gins2Q9D600 185 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Rtn3Q9ES97 964 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mgat1P27808 447 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 PRAG1Q571I4 1179 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tcf12Q61286 706 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tmem59lQ7TNI2 337 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Stkld1Q80YS9 662 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pdzph1Q8BGR1 1238 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Fam49aQ8BHZ0 323 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gnl3Q8CI11 538 aaKnown RBP13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 UvragQ8K245 698 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mtss1Q8R1S4 759 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tk2Q9R088 270 aa13.06□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Prl3b1P09586 222 aa13.05□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Msx3P70354 204 aa13.05□□□□□ -0.32
Ldb3-201ENSMUST00000022327 RetsatQ64FW2 609 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms