RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Ddah1Q9CWS0 285 aa13.23□□□□□ -0.29
Trim23-201ENSMUST00000022225 QpctQ9CYK2 362 aa13.23□□□□□ -0.29
Trim23-201ENSMUST00000022225 Actrt1Q9D9J3 376 aa13.23□□□□□ -0.29
Trim23-201ENSMUST00000022225 Zmym2Q9CU65 1376 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Duox1A2AQ92 1551 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Tns3Q5SSZ5 1440 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 1700016G14RikA0A286YCZ6 238 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Armc3A2AU72 881 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Speer2E9Q9U2 264 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Galnt4O08832 578 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Magea5O89009 320 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Magea8O89012 320 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Usp53P15975 1069 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Kpnb1P70168 876 aaKnown RBP13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Igsf9Q05BQ1 1179 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 MlxipQ2VPU4 917 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Cnga4Q3UW12 575 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ddhd1Q80YA3 547 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 C130026I21RikQ8C898 291 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 4921504E06RikQ8CET2 560 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 CbsQ91WT9 561 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Grtp1Q9D3N8 359 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ndufa13Q9ERS2 144 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Rtn3Q9ES97 964 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Gfpt2Q9Z2Z9 682 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 6030498E09RikB1AX85 169 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Orc4O88708 433 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Mtus1Q5HZI1 1210 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Itm2aQ61500 263 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 PhkbQ7TSH2 1085 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ttll4Q80UG8 1193 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Thap3Q8BJ25 218 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 DlatQ8BMF4 642 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Stx18Q8VDS8 334 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Pde6cQ91ZQ1 861 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Lrrc59Q922Q8 307 aaKnown RBP13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Mad2l2Q9D752 211 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Uchl3Q9JKB1 230 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ssc5dQ8BV57 1371 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ildr2B5TVM2 661 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Rfx8D3YU81 596 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Vmn2r72D3Z4N8 856 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ttc7bE9Q6P5 843 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Capn6O35646 641 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ddx10Q80Y44 875 aaKnown RBP13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Foxp3Q99JB6 429 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Batf3Q9D275 118 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 MajinQ9D992 256 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 HemgnQ9ERZ0 503 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Prl2a1Q9JHK0 228 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Cyp39a1Q9JKJ9 470 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Plod1Q9R0E2 728 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Slc26a4Q9R155 780 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Cib2Q9Z309 187 aa13.22□□□□□ -0.29
Trim23-201ENSMUST00000022225 Gm20509G3UZF1 325 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Snrpa1P57784 255 aaKnown RBP13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Setd4P58467 439 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Aars2Q14CH7 980 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Bpifb5Q3UQ05 490 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Cage1Q5IR70 849 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ppp1r13bQ62415 1087 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Llgl1Q80Y17 1036 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Fsd1lQ8BYN5 507 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 AdpgkQ8VDL4 496 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Tekt2Q922G7 430 aa13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Ctnnbl1Q9CWL8 563 aaKnown RBP13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 RnmtQ9D0L8 465 aaKnown RBP13.21□□□□□ -0.29
Trim23-201ENSMUST00000022225 Chil3O35744 398 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nr2f2P43135 414 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Eef2P58252 858 aaKnown RBP13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Znf652Q5DU09 608 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 B3gnt3Q5JCS9 372 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rev1Q920Q2 1249 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tmem174Q9DCX7 243 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Usp31E9Q6Y8 1344 aa13.21□□□□□ -0.3
Trim23-201ENSMUST00000022225 Shank3Q4ACU6 1730 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gpr161B2RPY5 545 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Eef1bO70251 225 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Xrcc5P27641 732 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rab17P35292 214 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nrp1P97333 923 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Pde1aQ61481 565 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Six1Q62231 284 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tfe3Q64092 572 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Dhx37Q6NZL1 1150 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ssxb10Q6XAR7 170 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Chn2Q80XD1 332 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Chtf18Q8BIW9 969 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ccser1Q8C0C4 895 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Lin52Q8CD94 116 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Trip10Q8CJ53 603 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Dhx36Q8VHK9 1001 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 GatbQ99JT1 557 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Terb2Q9D494 218 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 IcmtQ9EQK7 283 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 NesQ6P5H2 1864 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rpl13P47963 211 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 PtpreP49446 699 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nat1P50294 290 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ppp1r21Q3TDD9 780 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms