RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J COX17Q12287 69 aa4.89□□□□□ -1.63
HSX1tR(CCU)J PST2Q12335 198 aaKnown RBP4.89□□□□□ -1.63
HSX1tR(CCU)J SSA3P09435 649 aaKnown RBP4.88□□□□□ -1.63
HSX1tR(CCU)J PHO80P20052 293 aa4.88□□□□□ -1.63
HSX1tR(CCU)J MDH3P32419 343 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
HSX1tR(CCU)J COS9P36034 407 aa4.88□□□□□ -1.63
HSX1tR(CCU)J MRPL16P38064 232 aa4.88□□□□□ -1.63
HSX1tR(CCU)J YBR138CP38277 524 aa4.88□□□□□ -1.63
HSX1tR(CCU)J RPS20P38701 121 aaKnown RBP4.88□□□□□ -1.63
HSX1tR(CCU)J KRE29P40026 464 aa4.88□□□□□ -1.63
HSX1tR(CCU)J GVP36P40531 326 aaKnown RBP4.88□□□□□ -1.63
HSX1tR(CCU)J MPH1P40562 993 aa4.88□□□□□ -1.63
HSX1tR(CCU)J NIT2P47016 307 aa4.88□□□□□ -1.63
HSX1tR(CCU)J HSV2P50079 448 aaPredicted RBP4.88□□□□□ -1.63
HSX1tR(CCU)J SLD3P53135 668 aa4.88□□□□□ -1.63
HSX1tR(CCU)J ALG12P53730 551 aa4.88□□□□□ -1.63
HSX1tR(CCU)J YNR040WP53736 256 aa4.88□□□□□ -1.63
HSX1tR(CCU)J APM1Q00776 475 aaPredicted RBP4.88□□□□□ -1.63
HSX1tR(CCU)J RNH1Q04740 348 aa4.88□□□□□ -1.63
HSX1tR(CCU)J MLC2Q06580 163 aa4.88□□□□□ -1.63
HSX1tR(CCU)J HRT1Q08273 121 aa4.88□□□□□ -1.63
HSX1tR(CCU)J YDL176WQ12027 708 aa4.88□□□□□ -1.63
HSX1tR(CCU)J PRS5Q12265 496 aaKnown RBP4.88□□□□□ -1.63
HSX1tR(CCU)J CDC36P06100 191 aaPredicted RBP4.87□□□□□ -1.63
HSX1tR(CCU)J CAM1P29547 415 aaKnown RBP4.87□□□□□ -1.63
HSX1tR(CCU)J KRE6P32486 720 aa4.87□□□□□ -1.63
HSX1tR(CCU)J MRPL39P36533 70 aa4.87□□□□□ -1.63
HSX1tR(CCU)J AIM3P38266 947 aaKnown RBP4.87□□□□□ -1.63
HSX1tR(CCU)J PDS1P40316 373 aaPredicted RBP4.87□□□□□ -1.63
HSX1tR(CCU)J YTA6P40328 754 aa4.87□□□□□ -1.63
HSX1tR(CCU)J HIS6P40545 261 aa4.87□□□□□ -1.63
HSX1tR(CCU)J RET2P43621 546 aa4.87□□□□□ -1.63
HSX1tR(CCU)J COS10P52924 374 aa4.87□□□□□ -1.63
HSX1tR(CCU)J MRPL19P53875 158 aa4.87□□□□□ -1.63
HSX1tR(CCU)J PGA1P53896 198 aa4.87□□□□□ -1.63
HSX1tR(CCU)J YNL092WP53934 400 aa4.87□□□□□ -1.63
HSX1tR(CCU)J TLG1Q03322 224 aa4.87□□□□□ -1.63
HSX1tR(CCU)J YLR040CQ07988 224 aa4.87□□□□□ -1.63
HSX1tR(CCU)J BAG7Q12128 409 aa4.87□□□□□ -1.63
HSX1tR(CCU)J DBP10Q12389 995 aaKnown RBP4.87□□□□□ -1.63
HSX1tR(CCU)J YGR161W-CQ3E744 92 aa4.87□□□□□ -1.63
HSX1tR(CCU)J GAS1P22146 559 aaKnown RBP4.86□□□□□ -1.63
HSX1tR(CCU)J YCL002CP25565 263 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MCM10P32354 571 aa4.86□□□□□ -1.63
HSX1tR(CCU)J TIF3P34167 436 aaKnown RBP4.86□□□□□ -1.63
HSX1tR(CCU)J BAP2P38084 609 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MAL32P38158 584 aa4.86□□□□□ -1.63
HSX1tR(CCU)J AMN1P38285 549 aaPredicted RBP4.86□□□□□ -1.63
HSX1tR(CCU)J VBA2P38358 474 aaKnown RBP4.86□□□□□ -1.63
HSX1tR(CCU)J PTH1P38876 190 aaKnown RBP4.86□□□□□ -1.63
HSX1tR(CCU)J IPT1P38954 527 aa4.86□□□□□ -1.63
HSX1tR(CCU)J NAS2P40555 220 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MSS2P40990 351 aa4.86□□□□□ -1.63
HSX1tR(CCU)J SSY5P47002 699 aa4.86□□□□□ -1.63
HSX1tR(CCU)J BRR6P53062 197 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MON1P53129 644 aa4.86□□□□□ -1.63
HSX1tR(CCU)J NQM1P53228 333 aaPredicted RBP4.86□□□□□ -1.63
HSX1tR(CCU)J MAL12P53341 584 aa4.86□□□□□ -1.63
HSX1tR(CCU)J RRN9P53437 365 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MNT4P53745 580 aa4.86□□□□□ -1.63
HSX1tR(CCU)J KAP120Q02932 1032 aa4.86□□□□□ -1.63
HSX1tR(CCU)J RSM24Q03976 319 aa4.86□□□□□ -1.63
HSX1tR(CCU)J AGE1Q04412 482 aa4.86□□□□□ -1.63
HSX1tR(CCU)J COQ11Q05892 277 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MRPL51Q06090 140 aaPredicted RBP4.86□□□□□ -1.63
HSX1tR(CCU)J MIM1Q08176 113 aa4.86□□□□□ -1.63
HSX1tR(CCU)J HMS1Q12398 434 aa4.86□□□□□ -1.63
HSX1tR(CCU)J TRM10Q12400 293 aa4.86□□□□□ -1.63
HSX1tR(CCU)J YHR214C-EQ8TGK0 99 aa4.86□□□□□ -1.63
HSX1tR(CCU)J MED11Q99278 115 aa4.86□□□□□ -1.63
HSX1tR(CCU)J SEC12P11655 471 aa4.85□□□□□ -1.63
HSX1tR(CCU)J IDP1P21954 428 aaKnown RBP4.85□□□□□ -1.63
HSX1tR(CCU)J MAK32P23060 363 aa4.85□□□□□ -1.63
HSX1tR(CCU)J PPA2P28239 310 aa4.85□□□□□ -1.63
HSX1tR(CCU)J SUR1P33300 382 aa4.85□□□□□ -1.63
HSX1tR(CCU)J SOF1P33750 489 aaKnown RBP4.85□□□□□ -1.63
HSX1tR(CCU)J GOS1P38736 223 aa4.85□□□□□ -1.63
HSX1tR(CCU)J NTA1P40354 457 aa4.85□□□□□ -1.63
HSX1tR(CCU)J SAM37P50110 327 aa4.85□□□□□ -1.63
HSX1tR(CCU)J LYS5P50113 272 aa4.85□□□□□ -1.63
HSX1tR(CCU)J PCP1P53259 346 aa4.85□□□□□ -1.63
HSX1tR(CCU)J BUD17P53727 317 aa4.85□□□□□ -1.63
HSX1tR(CCU)J NUP116Q02630 1113 aa4.85□□□□□ -1.63
HSX1tR(CCU)J GRX5Q02784 150 aa4.85□□□□□ -1.63
HSX1tR(CCU)J SNZ1Q03148 297 aa4.85□□□□□ -1.63
HSX1tR(CCU)J BNA7Q04066 261 aa4.85□□□□□ -1.63
HSX1tR(CCU)J TAZ1Q06510 381 aa4.85□□□□□ -1.63
HSX1tR(CCU)J RAF1Q06891 181 aa4.85□□□□□ -1.63
HSX1tR(CCU)J PCL9Q12477 304 aa4.85□□□□□ -1.63
HSX1tR(CCU)J LSO1Q3E827 93 aa4.85□□□□□ -1.63
HSX1tR(CCU)J OPI3P05375 206 aa4.84□□□□□ -1.63
HSX1tR(CCU)J HEM4P06174 275 aa4.84□□□□□ -1.63
HSX1tR(CCU)J PPG1P32838 368 aa4.84□□□□□ -1.63
HSX1tR(CCU)J MTC6P38849 526 aa4.84□□□□□ -1.63
HSX1tR(CCU)J MDM31P38880 579 aa4.84□□□□□ -1.63
HSX1tR(CCU)J RIX1P38883 763 aaPredicted RBP4.84□□□□□ -1.63
HSX1tR(CCU)J SEN34P39707 275 aa4.84□□□□□ -1.63
HSX1tR(CCU)J IRC5P43610 853 aa4.84□□□□□ -1.63
HSX1tR(CCU)J ADO1P47143 340 aaKnown RBP4.84□□□□□ -1.63
HSX1tR(CCU)J RVB1Q03940 463 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms