RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C PFS2P42841 465 aaKnown RBP2.55□□□□□ -2
CUP9YPL177C PMT4P46971 762 aa2.55□□□□□ -2
CUP9YPL177C YPL080CQ02826 108 aa2.55□□□□□ -2
CUP9YPL177C INP2Q03824 705 aa2.55□□□□□ -2
CUP9YPL177C YLR297WQ05899 129 aa2.55□□□□□ -2
CUP9YPL177C YLR012CQ07927 99 aa2.55□□□□□ -2
CUP9YPL177C PRM4Q12498 284 aa2.55□□□□□ -2
CUP9YPL177C ERD1P16151 362 aa2.54□□□□□ -2
CUP9YPL177C TRR2P38816 342 aa2.54□□□□□ -2
CUP9YPL177C FET3P38993 636 aa2.54□□□□□ -2
CUP9YPL177C FRT2P39734 528 aa2.54□□□□□ -2
CUP9YPL177C INA22P40576 216 aa2.54□□□□□ -2
CUP9YPL177C YFL040WP43562 540 aa2.54□□□□□ -2
CUP9YPL177C SDS23P53172 527 aa2.54□□□□□ -2
CUP9YPL177C IRC4Q03036 179 aa2.54□□□□□ -2
CUP9YPL177C MGR3Q04472 501 aa2.54□□□□□ -2
CUP9YPL177C ECM19Q06011 112 aa2.54□□□□□ -2
CUP9YPL177C RTC5Q12108 567 aaKnown RBP2.54□□□□□ -2
CUP9YPL177C PRM7Q12459 698 aa2.54□□□□□ -2
CUP9YPL177C CBP2P03874 630 aaPredicted RBP2.53□□□□□ -2
CUP9YPL177C MRPL20P22354 195 aaPredicted RBP2.53□□□□□ -2
CUP9YPL177C RPB9P27999 122 aa2.53□□□□□ -2
CUP9YPL177C ZRT1P32804 376 aa2.53□□□□□ -2
CUP9YPL177C YMR262WP38430 313 aa2.53□□□□□ -2
CUP9YPL177C YDR089WP38966 869 aa2.53□□□□□ -2
CUP9YPL177C RIB4P50861 169 aaPredicted RBP2.53□□□□□ -2
CUP9YPL177C APC4Q04601 652 aa2.53□□□□□ -2
CUP9YPL177C DTD1Q07648 150 aaKnown RBP2.53□□□□□ -2
CUP9YPL177C SAM4Q08985 325 aaKnown RBP2.53□□□□□ -2
CUP9YPL177C DFM1Q12743 341 aaKnown RBP2.53□□□□□ -2
CUP9YPL177C PET18P25362 215 aa2.52□□□□□ -2.01
CUP9YPL177C YKL187CP34231 750 aa2.52□□□□□ -2.01
CUP9YPL177C OKP1P53298 406 aa2.52□□□□□ -2.01
CUP9YPL177C DBP6P53734 629 aaKnown RBP2.52□□□□□ -2.01
CUP9YPL177C YNR066CP53752 436 aa2.52□□□□□ -2.01
CUP9YPL177C UBX2Q04228 584 aa2.52□□□□□ -2.01
CUP9YPL177C CUR1Q06469 252 aa2.52□□□□□ -2.01
CUP9YPL177C YPR195CQ06594 109 aa2.52□□□□□ -2.01
CUP9YPL177C PBP4Q07362 185 aaKnown RBP2.52□□□□□ -2.01
CUP9YPL177C MDY2Q12285 212 aa2.52□□□□□ -2.01
CUP9YPL177C YPR1Q12458 312 aa2.52□□□□□ -2.01
CUP9YPL177C CPT1P17898 393 aa2.51□□□□□ -2.01
CUP9YPL177C CKA2P19454 339 aa2.51□□□□□ -2.01
CUP9YPL177C CTM1P38818 585 aa2.51□□□□□ -2.01
CUP9YPL177C PES4P39684 611 aa2.51□□□□□ -2.01
CUP9YPL177C SNX41Q04053 625 aa2.51□□□□□ -2.01
CUP9YPL177C BI3Q9ZZW7 517 aa2.51□□□□□ -2.01
CUP9YPL177C CAR2P07991 424 aaKnown RBP2.5□□□□□ -2.01
CUP9YPL177C AGA2P32781 87 aa2.5□□□□□ -2.01
CUP9YPL177C YHR035WP38769 630 aa2.5□□□□□ -2.01
CUP9YPL177C SOP4P39543 234 aaPredicted RBP2.5□□□□□ -2.01
CUP9YPL177C SLM1P40485 686 aa2.5□□□□□ -2.01
CUP9YPL177C YIR035CP40579 254 aa2.5□□□□□ -2.01
CUP9YPL177C YGL118CP53132 145 aa2.5□□□□□ -2.01
CUP9YPL177C CAX4P53223 239 aa2.5□□□□□ -2.01
CUP9YPL177C ZRG17P53735 605 aa2.5□□□□□ -2.01
CUP9YPL177C SMD1Q02260 146 aaPredicted RBP2.5□□□□□ -2.01
CUP9YPL177C UTP23Q12339 254 aaKnown RBP2.5□□□□□ -2.01
CUP9YPL177C GCD2P12754 651 aaPredicted RBP2.49□□□□□ -2.01
CUP9YPL177C MSS116P15424 664 aaKnown RBP2.49□□□□□ -2.01
CUP9YPL177C INO2P26798 304 aa2.49□□□□□ -2.01
CUP9YPL177C AST1P35183 429 aa2.49□□□□□ -2.01
CUP9YPL177C YBR062CP38239 180 aa2.49□□□□□ -2.01
CUP9YPL177C ASG7P46993 209 aa2.49□□□□□ -2.01
CUP9YPL177C IGO1P53897 168 aa2.49□□□□□ -2.01
CUP9YPL177C GMC1Q04399 608 aa2.49□□□□□ -2.01
CUP9YPL177C YPL245WQ12179 454 aaKnown RBP2.49□□□□□ -2.01
CUP9YPL177C TFC7Q12415 435 aa2.49□□□□□ -2.01
CUP9YPL177C PFK27Q12471 397 aaPredicted RBP2.49□□□□□ -2.01
CUP9YPL177C GPX1P36014 167 aa2.48□□□□□ -2.01
CUP9YPL177C YPC1P38298 316 aa2.48□□□□□ -2.01
CUP9YPL177C MNN9P39107 395 aaKnown RBP2.48□□□□□ -2.01
CUP9YPL177C YIL054WP40524 105 aa2.48□□□□□ -2.01
CUP9YPL177C MIC19P43594 170 aa2.48□□□□□ -2.01
CUP9YPL177C CPR7P47103 393 aa2.48□□□□□ -2.01
CUP9YPL177C YGR266WP53326 701 aa2.48□□□□□ -2.01
CUP9YPL177C DIB1Q06819 143 aaPredicted RBP2.48□□□□□ -2.01
CUP9YPL177C YOR292CQ08743 309 aa2.48□□□□□ -2.01
CUP9YPL177C TRM10Q12400 293 aa2.48□□□□□ -2.01
CUP9YPL177C TDH3P00359 332 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
CUP9YPL177C CUP2P15315 225 aa2.47□□□□□ -2.01
CUP9YPL177C MCH2P36032 473 aa2.47□□□□□ -2.01
CUP9YPL177C YIL059CP40520 121 aa2.47□□□□□ -2.01
CUP9YPL177C COS4P43542 379 aa2.47□□□□□ -2.01
CUP9YPL177C VOA1P53262 265 aa2.47□□□□□ -2.01
CUP9YPL177C VAC14Q06708 880 aa2.47□□□□□ -2.01
CUP9YPL177C YPS3Q12303 508 aa2.47□□□□□ -2.01
CUP9YPL177C RAD7P06779 565 aa2.46□□□□□ -2.02
CUP9YPL177C RPL31AP0C2H8 113 aaKnown RBP2.46□□□□□ -2.02
CUP9YPL177C CDC40P40968 455 aaPredicted RBP2.46□□□□□ -2.02
CUP9YPL177C BIO4P53630 237 aa2.46□□□□□ -2.02
CUP9YPL177C SEC13Q04491 297 aaKnown RBP2.46□□□□□ -2.02
CUP9YPL177C RRG8Q06109 277 aa2.46□□□□□ -2.02
CUP9YPL177C YLR446WQ06204 433 aa2.46□□□□□ -2.02
CUP9YPL177C APC9Q12107 265 aa2.46□□□□□ -2.02
CUP9YPL177C RFM1Q12192 310 aa2.46□□□□□ -2.02
CUP9YPL177C PRP46Q12417 451 aaPredicted RBP2.46□□□□□ -2.02
CUP9YPL177C DCP1Q12517 231 aaPredicted RBP2.46□□□□□ -2.02
CUP9YPL177C LAG2Q92325 660 aa2.46□□□□□ -2.02
CUP9YPL177C SAR1P20606 190 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms