RNA–Protein interactions for RNA: YPL149W

ATG5, Transcript of Conserved protein involved in autophagy and the Cvt pathway, yeast

Gene ATG5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG5	YPL149W	SPO19	Q03029	223 aa		3.01	□□□□□ -1.93
ATG5	YPL149W	VHS1	Q03785	461 aa		3.01	□□□□□ -1.93
ATG5	YPL149W	ECM18	Q04623	453 aa		3.01	□□□□□ -1.93
ATG5	YPL149W	YOL029C	Q08187	201 aa		3.01	□□□□□ -1.93
ATG5	YPL149W	YIL002W-A	Q3E7Z5	69 aa		3.01	□□□□□ -1.93
ATG5	YPL149W	STE2	D6VTK4	431 aa		3	□□□□□ -1.93
ATG5	YPL149W	NOP1	P15646	327 aa	Known RBP	3	□□□□□ -1.93
ATG5	YPL149W	GPI12	P23797	304 aa		3	□□□□□ -1.93
ATG5	YPL149W	MRPS9	P38120	278 aa		3	□□□□□ -1.93
ATG5	YPL149W	YHR035W	P38769	630 aa		3	□□□□□ -1.93
ATG5	YPL149W	YGL185C	P53100	379 aa		3	□□□□□ -1.93
ATG5	YPL149W	BIO4	P53630	237 aa		3	□□□□□ -1.93
ATG5	YPL149W	SNX41	Q04053	625 aa		3	□□□□□ -1.93
ATG5	YPL149W	DTD1	Q07648	150 aa	Known RBP	3	□□□□□ -1.93
ATG5	YPL149W	APC9	Q12107	265 aa		3	□□□□□ -1.93
ATG5	YPL149W	TIR4	Q12218	487 aa	Predicted RBP	3	□□□□□ -1.93
ATG5	YPL149W	FLO11	P08640	1367 aa		3	□□□□□ -1.93
ATG5	YPL149W	MRPL20	P22354	195 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG5	YPL149W	CSM1	P25651	190 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	CYM1	P32898	989 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	SWD2	P36104	329 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG5	YPL149W	RCK1	P38622	512 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	CTM1	P38818	585 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	PET8	P38921	284 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	COX16	P47081	118 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	YNL050C	P53952	270 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	EGD1	Q02642	157 aa	Known RBP	2.99	□□□□□ -1.93
ATG5	YPL149W	MIM1	Q08176	113 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	SIA1	Q12212	622 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	UTP23	Q12339	254 aa	Known RBP	2.99	□□□□□ -1.93
ATG5	YPL149W	PRM4	Q12498	284 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	YAL067W-A	Q8TGK6	75 aa		2.99	□□□□□ -1.93
ATG5	YPL149W	INO2	P26798	304 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	PPQ1	P32945	549 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	EFM1	P38732	585 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	SOP4	P39543	234 aa	Predicted RBP	2.98	□□□□□ -1.93
ATG5	YPL149W	YER184C	P39961	794 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	SED5	Q01590	340 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	APC4	Q04601	652 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	IZH4	Q99393	312 aa		2.98	□□□□□ -1.93
ATG5	YPL149W	RPS19A	P07280	144 aa	Known RBP	2.97	□□□□□ -1.93
ATG5	YPL149W	RPS19B	P07281	144 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG5	YPL149W	RPL16B	P26785	198 aa	Known RBP	2.97	□□□□□ -1.93
ATG5	YPL149W	TIP20	P33891	701 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	MID2	P36027	376 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	YFL012W	P43580	148 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	INP1	Q03694	420 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	VTI1	Q04338	217 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	ERV41	Q04651	352 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	YDR018C	Q12185	396 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	ERP3	Q12403	225 aa		2.97	□□□□□ -1.93
ATG5	YPL149W	MEK1	P24719	497 aa	Predicted RBP	2.96	□□□□□ -1.94
ATG5	YPL149W	RFT1	P38206	574 aa	Predicted RBP	2.96	□□□□□ -1.94
ATG5	YPL149W	YPC1	P38298	316 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	RTT105	P40063	208 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	SLM1	P40485	686 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	KEL2	P50090	882 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	SDS23	P53172	527 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	SWC4	P53201	476 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	FMP48	P53233	369 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	YNL260C	P53846	198 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	INP2	Q03824	705 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	YMR244W	Q04018	355 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	UTP15	Q04305	513 aa	Known RBP	2.96	□□□□□ -1.94
ATG5	YPL149W	BSC6	Q08280	497 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	YOL085C	Q99345	113 aa		2.96	□□□□□ -1.94
ATG5	YPL149W	TPI1	P00942	248 aa	Known RBP	2.95	□□□□□ -1.94
ATG5	YPL149W	RPL31A	P0C2H8	113 aa	Known RBP	2.95	□□□□□ -1.94
ATG5	YPL149W	ICL1	P28240	557 aa	Predicted RBP	2.95	□□□□□ -1.94
ATG5	YPL149W	YKL187C	P34231	750 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	YKL070W	P36087	169 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	DBP7	P36120	742 aa	Known RBP	2.95	□□□□□ -1.94
ATG5	YPL149W	MND1	P53102	219 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	ECM11	Q04110	302 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	YPL245W	Q12179	454 aa	Known RBP	2.95	□□□□□ -1.94
ATG5	YPL149W	TFC7	Q12415	435 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	BI3	Q9ZZW7	517 aa		2.95	□□□□□ -1.94
ATG5	YPL149W	RIB7	P33312	244 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	MCH2	P36032	473 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	PEX18	P38855	283 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	GDS1	P41913	522 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	GTO1	P48239	356 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	COQ5	P49017	307 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	YNR066C	P53752	436 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	GMC1	Q04399	608 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	ASR1	Q06834	288 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	POM33	Q12164	279 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	RRP42	Q12277	265 aa	Predicted RBP	2.94	□□□□□ -1.94
ATG5	YPL149W	PRP46	Q12417	451 aa	Predicted RBP	2.94	□□□□□ -1.94
ATG5	YPL149W	FMP16	Q12497	93 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	LAG2	Q92325	660 aa		2.94	□□□□□ -1.94
ATG5	YPL149W	AUS1	Q08409	1394 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	RIP-Chip
ATG5	YPL149W	OM45	P16547	393 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	ZRT3	P34240	503 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	YBR062C	P38239	180 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	HIS2	P38635	335 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	VPS45	P38932	577 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	YIA6	P40556	373 aa		2.93	□□□□□ -1.94
ATG5	YPL149W	AGP3	P43548	558 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms