RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C MRL1Q06815 381 aa6.38□□□□□ -1.39
UME1YPL139C SYO1Q07395 620 aa6.38□□□□□ -1.39
UME1YPL139C IRC19Q07843 230 aa6.38□□□□□ -1.39
UME1YPL139C HMS1Q12398 434 aa6.38□□□□□ -1.39
UME1YPL139C RHO1P06780 209 aaKnown RBP6.37□□□□□ -1.39
UME1YPL139C CAR2P07991 424 aaKnown RBP6.37□□□□□ -1.39
UME1YPL139C PPA2P28239 310 aa6.37□□□□□ -1.39
UME1YPL139C PRE2P30656 287 aaKnown RBP6.37□□□□□ -1.39
UME1YPL139C BAT2P47176 376 aaKnown RBP6.37□□□□□ -1.39
UME1YPL139C PCP1P53259 346 aa6.37□□□□□ -1.39
UME1YPL139C DSL1P53847 754 aa6.37□□□□□ -1.39
UME1YPL139C KAP120Q02932 1032 aa6.37□□□□□ -1.39
UME1YPL139C YPR147CQ06522 304 aaKnown RBP6.37□□□□□ -1.39
UME1YPL139C RAF1Q06891 181 aa6.37□□□□□ -1.39
UME1YPL139C COQ10Q08058 207 aa6.37□□□□□ -1.39
UME1YPL139C HNT3Q08702 217 aa6.37□□□□□ -1.39
UME1YPL139C SPC3Q12133 184 aa6.37□□□□□ -1.39
UME1YPL139C SET6Q12529 373 aa6.37□□□□□ -1.39
UME1YPL139C FUR4P05316 633 aaKnown RBP6.36□□□□□ -1.39
UME1YPL139C CYS4P32582 507 aaKnown RBP6.36□□□□□ -1.39
UME1YPL139C SOF1P33750 489 aaKnown RBP6.36□□□□□ -1.39
UME1YPL139C JEN1P36035 616 aa6.36□□□□□ -1.39
UME1YPL139C MRPL39P36533 70 aa6.36□□□□□ -1.39
UME1YPL139C LSM4P40070 187 aaKnown RBP6.36□□□□□ -1.39
UME1YPL139C COG3P40094 801 aa6.36□□□□□ -1.39
UME1YPL139C VHR1P40522 640 aa6.36□□□□□ -1.39
UME1YPL139C MON1P53129 644 aa6.36□□□□□ -1.39
UME1YPL139C PRM8P53174 237 aa6.36□□□□□ -1.39
UME1YPL139C DAM1P53267 343 aa6.36□□□□□ -1.39
UME1YPL139C ASI2P53895 289 aa6.36□□□□□ -1.39
UME1YPL139C ASI1P54074 624 aa6.36□□□□□ -1.39
UME1YPL139C YDR102CQ03864 110 aa6.36□□□□□ -1.39
UME1YPL139C YPR127WQ06494 345 aa6.36□□□□□ -1.39
UME1YPL139C DTD1Q07648 150 aaKnown RBP6.36□□□□□ -1.39
UME1YPL139C NTG2Q08214 380 aa6.36□□□□□ -1.39
UME1YPL139C YDL180WQ12301 547 aa6.36□□□□□ -1.39
UME1YPL139C BLM10P43583 2143 aa6.36□□□□□ -1.39
UME1YPL139C PDA1P16387 420 aaKnown RBP6.35□□□□□ -1.39
UME1YPL139C GAS1P22146 559 aaKnown RBP6.35□□□□□ -1.39
UME1YPL139C SNC1P31109 117 aa6.35□□□□□ -1.39
UME1YPL139C TRS65P32893 560 aa6.35□□□□□ -1.39
UME1YPL139C PAD1P33751 242 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
UME1YPL139C SPC34P36131 295 aa6.35□□□□□ -1.39
UME1YPL139C GAT2P40209 560 aa6.35□□□□□ -1.39
UME1YPL139C BNA1P47096 177 aa6.35□□□□□ -1.39
UME1YPL139C DML1Q03652 475 aa6.35□□□□□ -1.39
UME1YPL139C MRPL1Q04599 285 aa6.35□□□□□ -1.39
UME1YPL139C YOL159C-AQ3E769 90 aa6.35□□□□□ -1.39
UME1YPL139C YHR214C-EQ8TGK0 99 aa6.35□□□□□ -1.39
UME1YPL139C PHO4P07270 312 aaKnown RBP6.34□□□□□ -1.39
UME1YPL139C UBC8P28263 218 aa6.34□□□□□ -1.39
UME1YPL139C MCM10P32354 571 aa6.34□□□□□ -1.39
UME1YPL139C MRPS5P33759 307 aa6.34□□□□□ -1.39
UME1YPL139C YKL071WP36086 256 aa6.34□□□□□ -1.39
UME1YPL139C YBR063CP38083 404 aa6.34□□□□□ -1.39
UME1YPL139C ARN2P38724 620 aa6.34□□□□□ -1.39
UME1YPL139C SPO73P40031 143 aa6.34□□□□□ -1.39
UME1YPL139C DIM1P41819 318 aaKnown RBP6.34□□□□□ -1.39
UME1YPL139C ELA1P53861 379 aaPredicted RBP6.34□□□□□ -1.39
UME1YPL139C INN1P53901 409 aa6.34□□□□□ -1.39
UME1YPL139C YPL191CQ08930 360 aa6.34□□□□□ -1.39
UME1YPL139C DYN1P36022 4092 aa6.34□□□□□ -1.4
UME1YPL139C PEP4P07267 405 aaKnown RBP6.33□□□□□ -1.4
UME1YPL139C SNF4P12904 322 aa6.33□□□□□ -1.4
UME1YPL139C YAK1P14680 807 aa6.33□□□□□ -1.4
UME1YPL139C NUP1P20676 1076 aa6.33□□□□□ -1.4
UME1YPL139C PCL1P24867 279 aa6.33□□□□□ -1.4
UME1YPL139C MDH3P32419 343 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
UME1YPL139C SLC1P33333 303 aa6.33□□□□□ -1.4
UME1YPL139C CTF8P38877 133 aa6.33□□□□□ -1.4
UME1YPL139C ISC1P40015 477 aaKnown RBP6.33□□□□□ -1.4
UME1YPL139C YIL165CP40446 119 aa6.33□□□□□ -1.4
UME1YPL139C IDP2P41939 412 aa6.33□□□□□ -1.4
UME1YPL139C HMO1Q03973 246 aaKnown RBP6.33□□□□□ -1.4
UME1YPL139C SNT309Q06091 175 aaPredicted RBP6.33□□□□□ -1.4
UME1YPL139C NIP7Q08962 181 aaKnown RBP6.33□□□□□ -1.4
UME1YPL139C MED2Q12124 431 aa6.33□□□□□ -1.4
UME1YPL139C MSN4P33749 630 aa6.32□□□□□ -1.4
UME1YPL139C MAE1P36013 669 aaKnown RBP6.32□□□□□ -1.4
UME1YPL139C FET3P38993 636 aa6.32□□□□□ -1.4
UME1YPL139C GDI1P39958 451 aaKnown RBP6.32□□□□□ -1.4
UME1YPL139C YIL166CP40445 542 aa6.32□□□□□ -1.4
UME1YPL139C STB1P42845 420 aa6.32□□□□□ -1.4
UME1YPL139C AGP3P43548 558 aa6.32□□□□□ -1.4
UME1YPL139C TYW3P53177 273 aa6.32□□□□□ -1.4
UME1YPL139C COS1P53822 381 aa6.32□□□□□ -1.4
UME1YPL139C SNO4Q04902 237 aa6.32□□□□□ -1.4
UME1YPL139C YDR286CQ05530 114 aa6.32□□□□□ -1.4
UME1YPL139C HSP33Q08914 237 aaKnown RBP6.32□□□□□ -1.4
UME1YPL139C HSP32Q08992 237 aa6.32□□□□□ -1.4
UME1YPL139C CDC36P06100 191 aaPredicted RBP6.31□□□□□ -1.4
UME1YPL139C SEC12P11655 471 aa6.31□□□□□ -1.4
UME1YPL139C CLB4P24871 460 aa6.31□□□□□ -1.4
UME1YPL139C GIT1P25346 518 aa6.31□□□□□ -1.4
UME1YPL139C PRP19P32523 503 aaKnown RBP6.31□□□□□ -1.4
UME1YPL139C VMA8P32610 256 aaKnown RBP6.31□□□□□ -1.4
UME1YPL139C YKL187CP34231 750 aa6.31□□□□□ -1.4
UME1YPL139C AST1P35183 429 aa6.31□□□□□ -1.4
UME1YPL139C GPX1P36014 167 aa6.31□□□□□ -1.4
UME1YPL139C HAS1Q03532 505 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 305.4 ms