RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	YML6	P51998	286 aa		0.5	□□□□□ -2.33
BEM3	YPL115C	RNH201	P53942	307 aa		0.5	□□□□□ -2.33
BEM3	YPL115C	UTP15	Q04305	513 aa	Known RBP	0.5	□□□□□ -2.33
BEM3	YPL115C	YLR179C	Q06252	201 aa	Known RBP	0.5	□□□□□ -2.33
BEM3	YPL115C	SGT1	Q08446	395 aa		0.5	□□□□□ -2.33
BEM3	YPL115C	YDL109C	Q12103	647 aa		0.5	□□□□□ -2.33
BEM3	YPL115C	TPT1	Q12272	230 aa	Known RBP	0.5	□□□□□ -2.33
BEM3	YPL115C	IRA1	P18963	3092 aa		0.5	□□□□□ -2.33
BEM3	YPL115C	HSP82	P02829	709 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	STE7	P06784	515 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	CAR2	P07991	424 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	FUN26	P31381	517 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	ZUO1	P32527	433 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	SWD2	P36104	329 aa	Predicted RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	DAD2	P36162	133 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MRPS9	P38120	278 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	STN1	P38960	494 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	EMC2	P47133	292 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	YGR117C	P53270	476 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	YMR102C	Q03177	834 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	SCS7	Q03529	384 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	PGC1	Q08959	321 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	CEX1	Q12453	761 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	PCL9	Q12477	304 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	SAL1	D6W196	494 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	CLC1	P17891	233 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MXR2	P25566	168 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	RPL16A	P26784	199 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	ITR2	P30606	609 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MEI5	P32489	222 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	SUR1	P33300	382 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	DBP7	P36120	742 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	PCH2	P38126	564 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	TOM22	P49334	152 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	CAX4	P53223	239 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	HST4	P53688	370 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	VAC7	P53950	1165 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	UTP6	Q02354	440 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	YPR195C	Q06594	109 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	NOP6	Q07623	225 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	DDC1	Q08949	612 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MMT2	Q08970	484 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MED2	Q12124	431 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	YDL199C	Q12407	687 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	GAL3	P13045	520 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	UTR1	P21373	530 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	GPI12	P23797	304 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	IMP1	P28627	190 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	PMT2	P31382	759 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	BUD2	P33314	1104 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	MPP10	P47083	593 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	NAS6	P50086	228 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	YGL118C	P53132	145 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	VHT1	P53241	593 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	PDR16	P53860	351 aa	Known RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	VHS1	Q03785	461 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	CSI1	Q04368	295 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	YLR413W	Q06689	675 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	YDL211C	Q12121	372 aa		0.49	□□□□□ -2.33
BEM3	YPL115C	RRP42	Q12277	265 aa	Predicted RBP	0.49	□□□□□ -2.33
BEM3	YPL115C	REP1	P03871	373 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	RPL23A	P0CX41	137 aa	Known RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	RPL23B	P0CX42	137 aa	Known RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	EPT1	P22140	391 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	TOA1	P32773	286 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	LIN1	P38852	340 aa	Predicted RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	PCL7	P40186	285 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.48	□□□□□ -2.33	not detected
BEM3	YPL115C	NBP1	P52919	319 aa	Predicted RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	PEX31	P53203	462 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	PXR1	P53335	271 aa	Predicted RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	RMI1	Q02685	241 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	YDR209C	Q03480	137 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	ECM11	Q04110	302 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	YPL150W	Q12152	901 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	ATG34	Q12292	412 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	YPK9	Q12697	1472 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	APC1	P53886	1748 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	PAN1	P32521	1480 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	CHD1	P32657	1468 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	ZRC1	P20107	442 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	URA10	P30402	227 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	YEF1	P32622	495 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	YPC1	P38298	316 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	COS4	P43542	379 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	CIN2	P46670	268 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	RTT102	P53330	157 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	MKC7	P53379	596 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	KTR6	P54070	446 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	SLT2	Q00772	484 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	RDS3	Q06835	107 aa	Predicted RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	AAD15	Q08361	143 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	IRA2	P19158	3079 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	GEA2	P39993	1459 aa	Known RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	UNG1	P12887	359 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	SRB2	P34162	210 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	GPI8	P49018	411 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	CWC22	P53333	577 aa	Known RBP	0.48	□□□□□ -2.33
BEM3	YPL115C	MSC3	Q05812	728 aa		0.48	□□□□□ -2.33
BEM3	YPL115C	SPP41	P38904	1435 aa		0.47	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms