RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YGL114WP53134 725 aa8.9□□□□□ -0.98
SSN3YPL042C IMO32P53219 342 aa8.9□□□□□ -0.98
SSN3YPL042C NQM1P53228 333 aaPredicted RBP8.9□□□□□ -0.98
SSN3YPL042C GPI1P53306 609 aa8.9□□□□□ -0.98
SSN3YPL042C PLM2Q04383 521 aa8.9□□□□□ -0.98
SSN3YPL042C SMA2Q04658 369 aa8.9□□□□□ -0.98
SSN3YPL042C RGC1Q06108 1083 aaKnown RBP8.9□□□□□ -0.98
SSN3YPL042C TRP4P07285 380 aaPredicted RBP8.89□□□□□ -0.99
SSN3YPL042C MSS1P32559 526 aaPredicted RBP8.89□□□□□ -0.99
SSN3YPL042C ANR2P36090 516 aaPredicted RBP8.89□□□□□ -0.99
SSN3YPL042C YKR078WP36158 585 aaKnown RBP8.89□□□□□ -0.99
SSN3YPL042C PFS1P38872 237 aa8.89□□□□□ -0.99
SSN3YPL042C FMP32P43557 207 aa8.89□□□□□ -0.99
SSN3YPL042C RHO3Q00245 231 aaKnown RBP8.89□□□□□ -0.99
SSN3YPL042C TIM44Q01852 431 aa8.89□□□□□ -0.99
SSN3YPL042C EKI1Q03764 534 aa8.89□□□□□ -0.99
SSN3YPL042C NEJ1Q06148 342 aa8.89□□□□□ -0.99
SSN3YPL042C RRP40Q08285 240 aaKnown RBP8.89□□□□□ -0.99
SSN3YPL042C YOL159CQ08300 171 aa8.89□□□□□ -0.99
SSN3YPL042C NMD4Q12129 218 aa8.89□□□□□ -0.99
SSN3YPL042C HRP1Q99383 534 aaKnown RBP8.89□□□□□ -0.99
SSN3YPL042C YCK1P23291 538 aa8.88□□□□□ -0.99
SSN3YPL042C TRX3P25372 127 aa8.88□□□□□ -0.99
SSN3YPL042C SRX1P36077 127 aa8.88□□□□□ -0.99
SSN3YPL042C WSC4P38739 605 aa8.88□□□□□ -0.99
SSN3YPL042C ATG7P38862 630 aa8.88□□□□□ -0.99
SSN3YPL042C POG1P40473 351 aa8.88□□□□□ -0.99
SSN3YPL042C GVP36P40531 326 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C GDS1P41913 522 aa8.88□□□□□ -0.99
SSN3YPL042C SBH2P52871 88 aa8.88□□□□□ -0.99
SSN3YPL042C CTK1Q03957 528 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C PFA4Q12006 378 aa8.88□□□□□ -0.99
SSN3YPL042C MDM35O60200 86 aa8.88□□□□□ -0.99
SSN3YPL042C ADE5,7P07244 802 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C HCM1P25364 564 aa8.88□□□□□ -0.99
SSN3YPL042C SOF1P33750 489 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C TRM7P38238 310 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C TIF34P40217 347 aaKnown RBP8.88□□□□□ -0.99
SSN3YPL042C FRE5Q08908 694 aa8.88□□□□□ -0.99
SSN3YPL042C MLH3Q12083 715 aa8.88□□□□□ -0.99
SSN3YPL042C STT4P37297 1900 aa8.87□□□□□ -0.99
SSN3YPL042C MSB2P32334 1306 aa8.87□□□□□ -0.99
SSN3YPL042C RIB1P38066 345 aa8.87□□□□□ -0.99
SSN3YPL042C PTC7P38797 343 aa8.87□□□□□ -0.99
SSN3YPL042C TIF11P38912 153 aaKnown RBP8.87□□□□□ -0.99
SSN3YPL042C SRP14P38985 146 aa8.87□□□□□ -0.99
SSN3YPL042C FAA2P39518 744 aa8.87□□□□□ -0.99
SSN3YPL042C CDC40P40968 455 aaPredicted RBP8.87□□□□□ -0.99
SSN3YPL042C PAC10P48363 199 aa8.87□□□□□ -0.99
SSN3YPL042C MTQ1P53944 314 aa8.87□□□□□ -0.99
SSN3YPL042C APM1Q00776 475 aaPredicted RBP8.87□□□□□ -0.99
SSN3YPL042C COA4Q05809 96 aa8.87□□□□□ -0.99
SSN3YPL042C YPR109WQ06104 294 aa8.87□□□□□ -0.99
SSN3YPL042C RTK1Q12100 620 aaPredicted RBP8.87□□□□□ -0.99
SSN3YPL042C WSC3Q12215 556 aa8.87□□□□□ -0.99
SSN3YPL042C RPS21BQ3E754 87 aaKnown RBP8.87□□□□□ -0.99
SSN3YPL042C COX3P00420 269 aa8.86□□□□□ -0.99
SSN3YPL042C BCY1P07278 416 aaKnown RBP8.86□□□□□ -0.99
SSN3YPL042C URE2P23202 354 aaKnown RBP8.86□□□□□ -0.99
SSN3YPL042C SLM5P25345 492 aaKnown RBP8.86□□□□□ -0.99
SSN3YPL042C CBT1P36038 271 aaPredicted RBP8.86□□□□□ -0.99
SSN3YPL042C MRPL4P36517 319 aa8.86□□□□□ -0.99
SSN3YPL042C CBP4P37267 147 aa8.86□□□□□ -0.99
SSN3YPL042C TAT1P38085 619 aa8.86□□□□□ -0.99
SSN3YPL042C DER1P38307 211 aa8.86□□□□□ -0.99
SSN3YPL042C RMD6P39975 231 aa8.86□□□□□ -0.99
SSN3YPL042C BUR6P40096 142 aa8.86□□□□□ -0.99
SSN3YPL042C YIL108WP40483 696 aaKnown RBP8.86□□□□□ -0.99
SSN3YPL042C AZF1P41696 914 aa8.86□□□□□ -0.99
SSN3YPL042C YJL118WP47022 219 aa8.86□□□□□ -0.99
SSN3YPL042C SCY1P53009 804 aa8.86□□□□□ -0.99
SSN3YPL042C UFD1P53044 361 aa8.86□□□□□ -0.99
SSN3YPL042C ARL3Q02804 198 aa8.86□□□□□ -0.99
SSN3YPL042C MEU1Q07938 337 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
SSN3YPL042C YOR365CQ08844 703 aa8.86□□□□□ -0.99
SSN3YPL042C YOR029WQ12243 111 aa8.86□□□□□ -0.99
SSN3YPL042C RPS5P26783 225 aaKnown RBP8.85□□□□□ -0.99
SSN3YPL042C SEC17P32602 292 aa8.85□□□□□ -0.99
SSN3YPL042C ECM31P38122 312 aa8.85□□□□□ -0.99
SSN3YPL042C APQ12P40532 138 aa8.85□□□□□ -0.99
SSN3YPL042C MNN10P50108 393 aaKnown RBP8.85□□□□□ -0.99
SSN3YPL042C RRG8Q06109 277 aa8.85□□□□□ -0.99
SSN3YPL042C TY2A-LR1P0C2J4 438 aa8.85□□□□□ -0.99
SSN3YPL042C TY2A-FP0CX61 438 aa8.85□□□□□ -0.99
SSN3YPL042C TY2A-GR2P0CX62 438 aa8.85□□□□□ -0.99
SSN3YPL042C ZWF1P11412 505 aaKnown RBP8.85□□□□□ -0.99
SSN3YPL042C PRE7P23724 241 aaKnown RBP8.85□□□□□ -0.99
SSN3YPL042C TY2A-CP25383 438 aa8.85□□□□□ -0.99
SSN3YPL042C UGP1P32861 499 aaKnown RBP8.85□□□□□ -0.99
SSN3YPL042C SKG1P36169 355 aa8.85□□□□□ -0.99
SSN3YPL042C YBR241CP38142 488 aa8.85□□□□□ -0.99
SSN3YPL042C AIM46P38885 310 aa8.85□□□□□ -0.99
SSN3YPL042C BAP3P41815 604 aa8.85□□□□□ -0.99
SSN3YPL042C RPA34P47006 233 aaPredicted RBP8.85□□□□□ -0.99
SSN3YPL042C ECM27P47144 725 aa8.85□□□□□ -0.99
SSN3YPL042C MUP1P50276 574 aa8.85□□□□□ -0.99
SSN3YPL042C YGL235WP53071 178 aa8.85□□□□□ -0.99
SSN3YPL042C TY2A-DR2Q03483 438 aa8.85□□□□□ -0.99
SSN3YPL042C YOL131WQ08270 108 aa8.85□□□□□ -0.99
SSN3YPL042C TY2A-BQ12260 438 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 161.4 ms