RNA–Protein interactions for RNA: YOR381W

FRE3, Transcript of Ferric reductase, yeast

Gene FRE3, Length 2,136 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE3	YOR381W	SHS1	Q07657	551 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	GPM2	Q12008	311 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	COA6	Q3E846	104 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	APE1	P14904	514 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	PRE1	P22141	198 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	SEC22	P22214	214 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	YCR099C	P25657	155 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	MRPL4	P36517	319 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	MRPL11	P36521	249 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	YBR284W	P38150	797 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	MRP21	P38175	177 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	ARP1	P38696	384 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	EFM1	P38732	585 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	ARO9	P38840	513 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	VAB2	P40003	282 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	KTR7	P40504	517 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	CAT5	P41735	233 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	PFS2	P42841	465 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	RPN11	P43588	306 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	BIT61	P47041	543 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	CCC1	P47818	322 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	BUL1	P48524	976 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	COG7	P53195	279 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	TIM21	P53220	239 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	YKR011C	Q02209	353 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	YPL067C	Q02754	198 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	FRQ1	Q06389	190 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	GRC3	Q07845	632 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	IES4	Q08561	116 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	YPR027C	Q12079	277 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	HTA1	P04911	132 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	CTT1	P06115	562 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	ATP5	P09457	212 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	PRE9	P23638	258 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	COQ3	P27680	312 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	EHD3	P28817	500 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	ASH1	P34233	588 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SFK1	P35735	353 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SRO77	P38163	1010 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SHE1	P38200	338 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SSH1	P38353	490 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	HSE1	P38753	452 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	CTF8	P38877	133 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	YEL028W	P39989	153 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	FLX1	P40464	311 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	EMC5	P40540	141 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SNM1	P40993	198 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	LOC1	P43586	204 aa	Predicted RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	NNF1	P47149	201 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	AVT4	P50944	713 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	IRC15	Q02733	499 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	STD1	Q02794	444 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	GSF2	Q04697	403 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	BLS1	Q06071	122 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	SDO1	Q07953	250 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	YPL272C	Q08984	517 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	RTK1	Q12100	620 aa	Predicted RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	PRM4	Q12498	284 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	TMA17	Q12513	150 aa		4.84	□□□□□ -1.63
FRE3	YOR381W	TIF6	Q12522	245 aa	Known RBP	4.84	□□□□□ -1.63
FRE3	YOR381W	HIS1	P00498	297 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	YML003W	P0CF16	290 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	RPL4A	P10664	362 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	HOP1	P20050	605 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	RPD3	P32561	433 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	SKN1	P33336	771 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	DOA1	P36037	715 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	PNT1	P38969	423 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	DHH1	P39517	506 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	NPR2	P39923	615 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	GTT3	P39996	337 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	RPL4B	P49626	362 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	TAF4	P50105	388 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	ALG12	P53730	551 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	DUS1	P53759	423 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	RPL34A	P87262	121 aa	Predicted RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	YDR366C	P87287	132 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	FIT1	Q04433	528 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	SEC13	Q04491	297 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	RNH202	Q05635	350 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	HRD3	Q05787	833 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	YLR179C	Q06252	201 aa	Known RBP	4.84	□□□□□ -1.64
FRE3	YOR381W	RFU1	Q08003	200 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	NDJ1	Q12366	352 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	TFC7	Q12415	435 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	YNR034W-A	Q3E841	98 aa		4.84	□□□□□ -1.64
FRE3	YOR381W	ADH2	P00331	348 aa	Known RBP	4.83	□□□□□ -1.64
FRE3	YOR381W	RAS1	P01119	309 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	ASP3-2	P0CX77	362 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	ASP3-3	P0CX78	362 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	ASP3-4	P0CX79	362 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	ASP3-1	P0CZ17	362 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	VBA3	P25594	458 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	SOF1	P33750	489 aa	Known RBP	4.83	□□□□□ -1.64
FRE3	YOR381W	MTH1	P35198	433 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	ADD66	P36040	267 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	SHE3	P38272	425 aa	Known RBP	4.83	□□□□□ -1.64
FRE3	YOR381W	HXT14	P42833	540 aa		4.83	□□□□□ -1.64
FRE3	YOR381W	YJR056C	P47115	236 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms