RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YKL063CP35725 167 aa2.36□□□□□ -2.03
DNL4YOR005C IML3P38265 245 aa2.36□□□□□ -2.03
DNL4YOR005C KRE29P40026 464 aa2.36□□□□□ -2.03
DNL4YOR005C YER137CP40083 148 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C MMF1P40185 145 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C UTP25P40498 721 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C IRC24P40580 263 aa2.36□□□□□ -2.03
DNL4YOR005C IRC7P43623 340 aa2.36□□□□□ -2.03
DNL4YOR005C RAD17P48581 401 aa2.36□□□□□ -2.03
DNL4YOR005C YIP1P53039 248 aa2.36□□□□□ -2.03
DNL4YOR005C ARO8P53090 500 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C YNL095CP53932 642 aa2.36□□□□□ -2.03
DNL4YOR005C MRP51Q02950 344 aa2.36□□□□□ -2.03
DNL4YOR005C RRN11Q04712 507 aa2.36□□□□□ -2.03
DNL4YOR005C GLO2Q05584 274 aa2.36□□□□□ -2.03
DNL4YOR005C LOT6Q07923 191 aa2.36□□□□□ -2.03
DNL4YOR005C YEH2Q07950 538 aa2.36□□□□□ -2.03
DNL4YOR005C THI20Q08224 551 aa2.36□□□□□ -2.03
DNL4YOR005C NRT1Q08485 598 aa2.36□□□□□ -2.03
DNL4YOR005C ATP16Q12165 160 aa2.36□□□□□ -2.03
DNL4YOR005C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
DNL4YOR005C RRI1Q12468 440 aa2.36□□□□□ -2.03
DNL4YOR005C MSF1P08425 469 aa2.36□□□□□ -2.03
DNL4YOR005C SEN2P16658 377 aa2.36□□□□□ -2.03
DNL4YOR005C SAM2P19358 384 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C URE2P23202 354 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C RVS161P25343 265 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C MXR2P25566 168 aa2.36□□□□□ -2.03
DNL4YOR005C ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C VAM7P32912 316 aa2.36□□□□□ -2.03
DNL4YOR005C PHD1P36093 366 aa2.36□□□□□ -2.03
DNL4YOR005C SPC34P36131 295 aa2.36□□□□□ -2.03
DNL4YOR005C LYS1P38998 373 aaRIP-Chip data2.36□□□□□ -2.03not detected
DNL4YOR005C BTT1P40314 149 aaPredicted RBP2.36□□□□□ -2.03
DNL4YOR005C LIF1P53150 421 aa2.36□□□□□ -2.03
DNL4YOR005C DML1Q03652 475 aa2.36□□□□□ -2.03
DNL4YOR005C PEX10Q05568 337 aa2.36□□□□□ -2.03
DNL4YOR005C SUE1Q06524 206 aa2.36□□□□□ -2.03
DNL4YOR005C YOL019WQ08157 551 aa2.36□□□□□ -2.03
DNL4YOR005C SRL2Q12020 392 aa2.36□□□□□ -2.03
DNL4YOR005C YRM1Q12340 786 aa2.36□□□□□ -2.03
DNL4YOR005C RIF1P29539 1916 aa2.36□□□□□ -2.03
DNL4YOR005C HEM2P05373 342 aa2.36□□□□□ -2.03
DNL4YOR005C RHO1P06780 209 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C ARG80P07249 177 aa2.36□□□□□ -2.03
DNL4YOR005C PRB1P09232 635 aa2.36□□□□□ -2.03
DNL4YOR005C AMD1P15274 810 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C CDC23P16522 626 aa2.36□□□□□ -2.03
DNL4YOR005C LSB5P25369 354 aa2.36□□□□□ -2.03
DNL4YOR005C NUP2P32499 720 aa2.36□□□□□ -2.03
DNL4YOR005C MRPS5P33759 307 aa2.36□□□□□ -2.03
DNL4YOR005C YKL097CP34245 136 aa2.36□□□□□ -2.03
DNL4YOR005C CLG1P35190 452 aa2.36□□□□□ -2.03
DNL4YOR005C DOA1P36037 715 aa2.36□□□□□ -2.03
DNL4YOR005C SKG1P36169 355 aa2.36□□□□□ -2.03
DNL4YOR005C YHR045WP38775 560 aa2.36□□□□□ -2.03
DNL4YOR005C ATG7P38862 630 aa2.36□□□□□ -2.03
DNL4YOR005C MTW1P39731 289 aa2.36□□□□□ -2.03
DNL4YOR005C AIM10P39965 576 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C ISC1P40015 477 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C YER085CP40058 173 aa2.36□□□□□ -2.03
DNL4YOR005C JLP2P40206 208 aa2.36□□□□□ -2.03
DNL4YOR005C HPM1P40481 377 aa2.36□□□□□ -2.03
DNL4YOR005C HSH155P49955 971 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C SLM2P53955 656 aa2.36□□□□□ -2.03
DNL4YOR005C SAM50P53969 484 aa2.36□□□□□ -2.03
DNL4YOR005C YNL010WP53981 241 aaKnown RBP2.36□□□□□ -2.03
DNL4YOR005C PET117Q02771 107 aa2.36□□□□□ -2.03
DNL4YOR005C PNG1Q02890 363 aa2.36□□□□□ -2.03
DNL4YOR005C RSC9Q03124 581 aa2.36□□□□□ -2.03
DNL4YOR005C RSN1Q03516 953 aa2.36□□□□□ -2.03
DNL4YOR005C YMR209CQ03648 457 aa2.36□□□□□ -2.03
DNL4YOR005C COQ11Q05892 277 aa2.36□□□□□ -2.03
DNL4YOR005C GPN3Q06543 272 aa2.36□□□□□ -2.03
DNL4YOR005C SGT1Q08446 395 aa2.36□□□□□ -2.03
DNL4YOR005C APC2Q12440 853 aa2.36□□□□□ -2.03
DNL4YOR005C MER1P16523 270 aa2.35□□□□□ -2.03
DNL4YOR005C COQ3P27680 312 aa2.35□□□□□ -2.03
DNL4YOR005C RME1P32338 300 aaKnown RBP2.35□□□□□ -2.03
DNL4YOR005C SUA5P32579 426 aa2.35□□□□□ -2.03
DNL4YOR005C PEX2P32800 271 aa2.35□□□□□ -2.03
DNL4YOR005C YKL162CP36052 402 aa2.35□□□□□ -2.03
DNL4YOR005C YCR041WP37265 110 aa2.35□□□□□ -2.03
DNL4YOR005C IST2P38250 946 aa2.35□□□□□ -2.03
DNL4YOR005C ATG12P38316 186 aa2.35□□□□□ -2.03
DNL4YOR005C SIM1P40472 476 aa2.35□□□□□ -2.03
DNL4YOR005C YAR1P46683 200 aa2.35□□□□□ -2.03
DNL4YOR005C ALB1P47019 175 aaPredicted RBP2.35□□□□□ -2.03
DNL4YOR005C SNX4P47057 423 aa2.35□□□□□ -2.03
DNL4YOR005C PHB2P50085 310 aa2.35□□□□□ -2.03
DNL4YOR005C KEL2P50090 882 aa2.35□□□□□ -2.03
DNL4YOR005C CLD1P53264 445 aa2.35□□□□□ -2.03
DNL4YOR005C RRN9P53437 365 aa2.35□□□□□ -2.03
DNL4YOR005C YNL033WP53964 284 aa2.35□□□□□ -2.03
DNL4YOR005C YNL019CP53975 284 aa2.35□□□□□ -2.03
DNL4YOR005C RLI1Q03195 608 aaKnown RBP2.35□□□□□ -2.03
DNL4YOR005C COA4Q05809 96 aa2.35□□□□□ -2.03
DNL4YOR005C YLR031WQ07978 186 aa2.35□□□□□ -2.03
DNL4YOR005C GPI12P23797 304 aa2.35□□□□□ -2.03
DNL4YOR005C DEG1P31115 442 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms