RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	HMS2	P47175	358 aa		3.17	□□□□□ -1.9
FRE4	YNR060W	YIP1	P53039	248 aa		3.17	□□□□□ -1.9
FRE4	YNR060W	ARK1	P53974	638 aa		3.17	□□□□□ -1.9
FRE4	YNR060W	CTL1	Q03220	320 aa	Known RBP	3.17	□□□□□ -1.9
FRE4	YNR060W	VHS1	Q03785	461 aa		3.17	□□□□□ -1.9
FRE4	YNR060W	MSS11	Q03825	758 aa		3.17	□□□□□ -1.9
FRE4	YNR060W	BNR1	P40450	1375 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	CNB1	P25296	175 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	RRT12	P25381	491 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	DEG1	P31115	442 aa	Known RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	TFC1	P32367	649 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	MRPS5	P33759	307 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	ANR2	P36090	516 aa	Predicted RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	PHD1	P36093	366 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	YHR182W	P38870	785 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	CCT4	P39078	528 aa	Known RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	GIM4	P40005	111 aa	Known RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	BTT1	P40314	149 aa	Predicted RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	NHP10	Q03435	203 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	SMP3	Q04174	516 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	YPR147C	Q06522	304 aa	Known RBP	3.16	□□□□□ -1.9
FRE4	YNR060W	OSW1	Q08692	278 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	KRE5	P22023	1365 aa		3.16	□□□□□ -1.9
FRE4	YNR060W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
FRE4	YNR060W	ARG4	P04076	463 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	RPP0	P05317	312 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	HEM2	P05373	342 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	RAD1	P06777	1100 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	ARF1	P11076	181 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	GPI12	P23797	304 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	CPR4	P25334	318 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	ERG1	P32476	496 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	CDC13	P32797	924 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	PRS2	P38620	318 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	ISC1	P40015	477 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	RGI1	P40043	161 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	CSM2	P40465	213 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	UFE1	P41834	346 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	PSA1	P41940	361 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	YJR111C	P47148	283 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	JHD2	P47156	728 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	PRP24	P49960	444 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	PHB2	P50085	310 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	PGA2	P53903	129 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	RSN1	Q03516	953 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	NAT4	Q04751	285 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	PAL1	Q05518	499 aa	Known RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	COQ11	Q05892	277 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	CTS2	Q06350	511 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	IRC10	Q08118	586 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	REX4	Q08237	289 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	PRP46	Q12417	451 aa	Predicted RBP	3.15	□□□□□ -1.9
FRE4	YNR060W	RRI1	Q12468	440 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	YOR338W	Q99326	363 aa		3.15	□□□□□ -1.9
FRE4	YNR060W	RPN13	O13563	156 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	RPL24A	P04449	155 aa	Known RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	PET9	P18239	318 aa	Known RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	CDC43	P18898	376 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	AAT2	P23542	418 aa	Known RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	SLM5	P25345	492 aa	Known RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	LSB5	P25369	354 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	CWP1	P28319	239 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	SUA5	P32579	426 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	COS9	P36034	407 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	YKR015C	P36111	568 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	LYS1	P38998	373 aa	RIP-Chip data	3.15	□□□□□ -1.91	not detected
FRE4	YNR060W	DHH1	P39517	506 aa	Known RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	SLM1	P40485	686 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	OTU1	P43558	301 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	MIC19	P43594	170 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	TMA22	P47089	198 aa	Predicted RBP	3.15	□□□□□ -1.91
FRE4	YNR060W	BIO4	P53630	237 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	FRE4	P53746	719 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	COS1	P53822	381 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	CAF40	P53829	373 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	YDC1	Q02896	317 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	MRP51	Q02950	344 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	YMD8	Q03697	442 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	SNX41	Q04053	625 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	YAP7	Q08182	245 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	BSC1	Q12140	328 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	RPN6	Q12377	434 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	NCB2	Q92317	146 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	YOR093C	Q12275	1648 aa		3.15	□□□□□ -1.91
FRE4	YNR060W	RPL25	P04456	142 aa	Known RBP	3.14	□□□□□ -1.91
FRE4	YNR060W	KIN28	P06242	306 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	CLN3	P13365	580 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YCR041W	P37265	110 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	RFS1	P38234	210 aa	Known RBP	3.14	□□□□□ -1.91
FRE4	YNR060W	ATG7	P38862	630 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YAT2	P40017	923 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	SHO1	P40073	367 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	MMF1	P40185	145 aa	Known RBP	3.14	□□□□□ -1.91
FRE4	YNR060W	YFL040W	P43562	540 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YJL016W	P47072	561 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	NBP35	P52920	328 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YNR048W	P53740	393 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YMR279C	Q03263	540 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	YDR249C	Q03787	373 aa		3.14	□□□□□ -1.91
FRE4	YNR060W	BUR2	Q05949	395 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms