RNA–Protein interactions for RNA: YNL107W

YAF9, Transcript of Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes, yeast

Gene YAF9, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAF9	YNL107W	SMP3	Q04174	516 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	YPR078C	Q06813	372 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	DTD1	Q07648	150 aa	Known RBP	0.68	□□□□□ -2.3
YAF9	YNL107W	APC5	Q08683	685 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	PRR2	Q12310	699 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	GPM3	Q12326	303 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	PRM4	Q12498	284 aa		0.68	□□□□□ -2.3
YAF9	YNL107W	DCP1	Q12517	231 aa	Predicted RBP	0.68	□□□□□ -2.3
YAF9	YNL107W	RPS16A	P0CX51	143 aa	Known RBP	0.67	□□□□□ -2.3
YAF9	YNL107W	RPS16B	P0CX52	143 aa	Known RBP	0.67	□□□□□ -2.3
YAF9	YNL107W	ZWF1	P11412	505 aa	Known RBP	0.67	□□□□□ -2.3
YAF9	YNL107W	ERG9	P29704	444 aa		0.67	□□□□□ -2.3
YAF9	YNL107W	BUD2	P33314	1104 aa		0.67	□□□□□ -2.3
YAF9	YNL107W	AIM33	Q04516	312 aa		0.67	□□□□□ -2.3
YAF9	YNL107W	MIM1	Q08176	113 aa		0.67	□□□□□ -2.3
YAF9	YNL107W	PEX27	Q08580	376 aa		0.67	□□□□□ -2.3
YAF9	YNL107W	YPL245W	Q12179	454 aa	Known RBP	0.67	□□□□□ -2.3
YAF9	YNL107W	RPL1A	P0CX43	217 aa	Known RBP	0.66	□□□□□ -2.3
YAF9	YNL107W	RPL1B	P0CX44	217 aa	Known RBP	0.66	□□□□□ -2.3
YAF9	YNL107W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
YAF9	YNL107W	LSM4	P40070	187 aa	Known RBP	0.66	□□□□□ -2.3
YAF9	YNL107W	SNL1	P40548	159 aa		0.66	□□□□□ -2.3
YAF9	YNL107W	YJR146W	P47174	117 aa		0.66	□□□□□ -2.3
YAF9	YNL107W	BIO4	P53630	237 aa		0.66	□□□□□ -2.3
YAF9	YNL107W	MRX9	Q07349	420 aa	Known RBP	0.66	□□□□□ -2.3
YAF9	YNL107W	CKI1	P20485	582 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	GRR1	P24814	1151 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	AIM29	P36154	155 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	PES4	P39684	611 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	HCH1	P53834	153 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	ALG9	P53868	555 aa	Known RBP	0.65	□□□□□ -2.31
YAF9	YNL107W	OSH6	Q02201	448 aa		0.65	□□□□□ -2.31
YAF9	YNL107W	EBS1	Q03466	884 aa	Known RBP	0.65	□□□□□ -2.31
YAF9	YNL107W	DPM1	P14020	267 aa	Known RBP	0.64	□□□□□ -2.31
YAF9	YNL107W	PSO2	P30620	661 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	RPN12	P32496	274 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	SUR1	P33300	382 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	JNM1	P36224	373 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	TRM7	P38238	310 aa	Known RBP	0.64	□□□□□ -2.31
YAF9	YNL107W	MMS21	P38632	267 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	YHR045W	P38775	560 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	FYV8	P46949	817 aa	Known RBP	0.64	□□□□□ -2.31
YAF9	YNL107W	YJL027C	P47063	138 aa	Predicted RBP	0.64	□□□□□ -2.31
YAF9	YNL107W	COS6	P53344	381 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	YNR066C	P53752	436 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	EMC6	Q12431	108 aa		0.64	□□□□□ -2.31
YAF9	YNL107W	TDH1	P00360	332 aa	Known RBP	0.63	□□□□□ -2.31
YAF9	YNL107W	REP1	P03871	373 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	SYS1	P41544	203 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	GYL1	Q04322	720 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	GRH1	Q04410	372 aa	Known RBP	0.63	□□□□□ -2.31
YAF9	YNL107W	NAT4	Q04751	285 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	ARC18	Q05933	178 aa	Known RBP	0.63	□□□□□ -2.31
YAF9	YNL107W	SPE3	Q12074	293 aa	Known RBP	0.63	□□□□□ -2.31
YAF9	YNL107W	YPL150W	Q12152	901 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	BOL1	Q3E793	110 aa		0.63	□□□□□ -2.31
YAF9	YNL107W	DCC1	P25559	380 aa		0.62	□□□□□ -2.31
YAF9	YNL107W	MXR2	P25566	168 aa		0.62	□□□□□ -2.31
YAF9	YNL107W	VIK1	Q12045	647 aa		0.62	□□□□□ -2.31
YAF9	YNL107W	AIM45	Q12480	344 aa	Known RBP	0.62	□□□□□ -2.31
YAF9	YNL107W	UTR1	P21373	530 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	LIF1	P53150	421 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	YGR266W	P53326	701 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	SLM2	P53955	656 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	SPC19	Q03954	165 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	INM2	Q05533	292 aa		0.61	□□□□□ -2.31
YAF9	YNL107W	RAD1	P06777	1100 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	COY1	P34237	679 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	MRPL49	P40858	161 aa	Predicted RBP	0.6	□□□□□ -2.31
YAF9	YNL107W	MND1	P53102	219 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	YFH1	Q07540	174 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	YOR292C	Q08743	309 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	SFG1	Q12507	346 aa		0.6	□□□□□ -2.31
YAF9	YNL107W	CDC13	P32797	924 aa	Known RBP	0.59	□□□□□ -2.31
YAF9	YNL107W	MRPL6	P32904	214 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	IML3	P38265	245 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	PEX32	P38292	413 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	MBA1	P38300	278 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	AYR1	P40471	297 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	YFL064C	P43540	174 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	YHC3	P47040	408 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	NNT1	Q05874	261 aa		0.59	□□□□□ -2.31
YAF9	YNL107W	RDL2	Q08742	149 aa	Known RBP	0.59	□□□□□ -2.31
YAF9	YNL107W	THR4	P16120	514 aa	Known RBP	0.58	□□□□□ -2.32
YAF9	YNL107W	GCG1	P32656	232 aa	Known RBP	0.58	□□□□□ -2.32
YAF9	YNL107W	UTP25	P40498	721 aa	Known RBP	0.58	□□□□□ -2.32
YAF9	YNL107W	TVP15	Q03860	143 aa		0.58	□□□□□ -2.32
YAF9	YNL107W	SEC13	Q04491	297 aa	Known RBP	0.58	□□□□□ -2.32
YAF9	YNL107W	CTS2	Q06350	511 aa		0.58	□□□□□ -2.32
YAF9	YNL107W	PUP2	P32379	260 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	YOR062C	P36025	268 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	SPL2	P38839	148 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	PET8	P38921	284 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	COG3	P40094	801 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	YMR134W	P40207	237 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	OST3	P48439	350 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	MLC1	P53141	149 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	GLE1	Q12315	538 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	AGC1	Q12482	902 aa		0.57	□□□□□ -2.32
YAF9	YNL107W	YAL063C-A	Q3E791	96 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms