RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	FLC3	P53121	802 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	YPR003C	P53394	754 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	NSG2	P53898	299 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	CTL1	Q03220	320 aa	Known RBP	4.68	□□□□□ -1.66
SEC39	YLR440C	DIG2	Q03373	323 aa	Known RBP	4.68	□□□□□ -1.66
SEC39	YLR440C	SCS7	Q03529	384 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	PKR1	Q03880	122 aa	Known RBP	4.68	□□□□□ -1.66
SEC39	YLR440C	NAT4	Q04751	285 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	GTT2	Q12390	233 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	YKL183C-A	Q3E765	70 aa		4.68	□□□□□ -1.66
SEC39	YLR440C	MF(ALPHA)1	P01149	165 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	GAL10	P04397	699 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SPS2	P08459	502 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SPO7	P18410	259 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ART10	P18634	518 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	ILV6	P25605	309 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	RFA3	P26755	122 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	ERG9	P29704	444 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SYN8	P31377	255 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SEC39	YLR440C	RER2	P35196	286 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	PRS4	P38063	326 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	SHO1	P40073	367 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SEC24	P40482	926 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	SPG5	P42933	373 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	YFR057W	P43625	151 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	MRX5	P47007	382 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	UBC7	Q02159	165 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	AIM34	Q03673	198 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	COS7	Q07788	383 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	OSW1	Q08692	278 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SVS1	Q12254	260 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	JLP1	Q12358	412 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	BCY1	P07278	416 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	YCR023C	P25351	611 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ADH7	P25377	361 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ARO7	P32178	256 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	RAD23	P32628	398 aa	Known RBP	4.67	□□□□□ -1.66
SEC39	YLR440C	RPC25	P35718	212 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	YKL077W	P36081	392 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	REG2	P38232	338 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SLM4	P38247	162 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ERV15	P38312	142 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ARN1	P38731	627 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	SOL3	P38858	249 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	AAD14	P42884	376 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	MIC19	P43594	170 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	IKS1	P47042	667 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	GLO1	P50107	326 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	INN1	P53901	409 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	YNL115C	P53925	644 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	ABF2	Q02486	183 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	YHM2	Q04013	314 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	IRC10	Q08118	586 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	TY1A-BR	Q12217	440 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	YPR014C	Q6B0W2	109 aa		4.67	□□□□□ -1.66
SEC39	YLR440C	HIP1	P06775	603 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	RPS18A	P0CX55	146 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	RPS18B	P0CX56	146 aa	Predicted RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	ISC10	P32645	267 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	COS9	P36034	407 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	ETR1	P38071	380 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	GOS1	P38736	223 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	FKH2	P41813	862 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	MAF1	P41910	395 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	NSE4	P43124	402 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	AAD10	P47182	288 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	DIE2	P50076	525 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	COS10	P52924	374 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	TPN1	P53099	579 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	IDP3	P53982	420 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	TIM8	P57744	87 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	YDR132C	Q03900	495 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	RXT3	Q07458	294 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	ENT4	Q07872	247 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	MED7	Q08278	222 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	RGT2	Q12300	763 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	YOR012W	Q12351	137 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	TPK2	P06245	380 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	POX1	P13711	748 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	YMR31	P19955	123 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	POF1	P25576	258 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	APN2	P38207	520 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	IKI1	P38874	309 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	SET5	P38890	526 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	YHR210C	P38893	341 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	VPS52	P39904	641 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	ARG2	P40360	574 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	MOB1	P40484	314 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	MAD2	P40958	196 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	YCH1	P42937	148 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	IRC8	P47046	822 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	SPP2	Q02521	185 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	CTK1	Q03957	528 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	NOC4	Q06512	552 aa	Predicted RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	SHS1	Q07657	551 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	SAM4	Q08985	325 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	RKI1	Q12189	258 aa		4.66	□□□□□ -1.66
SEC39	YLR440C	LPX1	Q12405	387 aa	Known RBP	4.66	□□□□□ -1.66
SEC39	YLR440C	FOL3	Q12676	427 aa	Predicted RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms