RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C CNB1P25296 175 aa5.8□□□□□ -1.48
SKI2YLR398C UPS2P35200 230 aa5.8□□□□□ -1.48
SKI2YLR398C MCR1P36060 302 aaKnown RBP5.8□□□□□ -1.48
SKI2YLR398C YMC2P38087 329 aa5.8□□□□□ -1.48
SKI2YLR398C YMR262WP38430 313 aa5.8□□□□□ -1.48
SKI2YLR398C SIP4P46954 829 aa5.8□□□□□ -1.48
SKI2YLR398C MPC1P53157 130 aaKnown RBP5.8□□□□□ -1.48
SKI2YLR398C GND2P53319 492 aa5.8□□□□□ -1.48
SKI2YLR398C YNR062CP53748 327 aa5.8□□□□□ -1.48
SKI2YLR398C UTP15Q04305 513 aaKnown RBP5.8□□□□□ -1.48
SKI2YLR398C MHR1Q06630 226 aa5.8□□□□□ -1.48
SKI2YLR398C YPR084WQ06821 456 aa5.8□□□□□ -1.48
SKI2YLR398C TDH2P00358 332 aaKnown RBP5.8□□□□□ -1.48
SKI2YLR398C CTF13P35203 478 aa5.8□□□□□ -1.48
SKI2YLR398C IRC22P40006 225 aa5.8□□□□□ -1.48
SKI2YLR398C UBC12P52491 188 aa5.8□□□□□ -1.48
SKI2YLR398C BRR6P53062 197 aa5.8□□□□□ -1.48
SKI2YLR398C OGG1P53397 376 aaPredicted RBP5.8□□□□□ -1.48
SKI2YLR398C SOK2P53438 785 aaPredicted RBP5.8□□□□□ -1.48
SKI2YLR398C PGA1P53896 198 aa5.8□□□□□ -1.48
SKI2YLR398C NAT3Q06504 195 aa5.8□□□□□ -1.48
SKI2YLR398C MFG1Q07684 458 aa5.8□□□□□ -1.48
SKI2YLR398C PET54P10834 293 aa5.8□□□□□ -1.48
SKI2YLR398C UTR1P21373 530 aa5.8□□□□□ -1.48
SKI2YLR398C FLO10P36170 1169 aa5.8□□□□□ -1.48
SKI2YLR398C SHM2P37291 469 aaKnown RBP5.8□□□□□ -1.48
SKI2YLR398C YBR241CP38142 488 aa5.8□□□□□ -1.48
SKI2YLR398C ECM34P38728 170 aa5.8□□□□□ -1.48
SKI2YLR398C SPO73P40031 143 aa5.8□□□□□ -1.48
SKI2YLR398C YJL043WP47053 257 aa5.8□□□□□ -1.48
SKI2YLR398C NSA1P53136 463 aaPredicted RBP5.8□□□□□ -1.48
SKI2YLR398C TRM13Q12383 476 aa5.8□□□□□ -1.48
SKI2YLR398C TFC7Q12415 435 aa5.8□□□□□ -1.48
SKI2YLR398C ISA2Q12425 185 aa5.8□□□□□ -1.48
SKI2YLR398C PHO5P00635 467 aa5.79□□□□□ -1.48
SKI2YLR398C POF1P25576 258 aa5.79□□□□□ -1.48
SKI2YLR398C GCV1P48015 400 aa5.79□□□□□ -1.48
SKI2YLR398C DAD3P69850 94 aa5.79□□□□□ -1.48
SKI2YLR398C YPL034WQ03083 165 aa5.79□□□□□ -1.48
SKI2YLR398C INP1Q03694 420 aa5.79□□□□□ -1.48
SKI2YLR398C TRM8Q12009 286 aa5.79□□□□□ -1.48
SKI2YLR398C YLR050CQ12155 161 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C ERP3Q12403 225 aa5.79□□□□□ -1.48
SKI2YLR398C CTT1P06115 562 aa5.79□□□□□ -1.48
SKI2YLR398C MDH1P17505 334 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SKI2YLR398C YCL002CP25565 263 aa5.79□□□□□ -1.48
SKI2YLR398C OAC1P32332 324 aa5.79□□□□□ -1.48
SKI2YLR398C PAU24P38155 120 aa5.79□□□□□ -1.48
SKI2YLR398C PCL5P38794 229 aa5.79□□□□□ -1.48
SKI2YLR398C RAD55P38953 406 aa5.79□□□□□ -1.48
SKI2YLR398C ULI1P43604 169 aa5.79□□□□□ -1.48
SKI2YLR398C MEP3P53390 489 aa5.79□□□□□ -1.48
SKI2YLR398C YLR413WQ06689 675 aa5.79□□□□□ -1.48
SKI2YLR398C YOL024WQ08172 172 aa5.79□□□□□ -1.48
SKI2YLR398C YOL073CQ08232 322 aa5.79□□□□□ -1.48
SKI2YLR398C JLP1Q12358 412 aa5.79□□□□□ -1.48
SKI2YLR398C ADH3P07246 375 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C NOP1P15646 327 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C HOP1P20050 605 aa5.79□□□□□ -1.48
SKI2YLR398C SCL1P21243 252 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C CDC13P32797 924 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C FAU1P40099 211 aa5.79□□□□□ -1.48
SKI2YLR398C CCC1P47818 322 aa5.79□□□□□ -1.48
SKI2YLR398C MRPL22P53881 309 aa5.79□□□□□ -1.48
SKI2YLR398C YPL039WQ03080 316 aa5.79□□□□□ -1.48
SKI2YLR398C RCR2Q03446 210 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C CTK1Q03957 528 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C ADH6Q04894 360 aaKnown RBP5.79□□□□□ -1.48
SKI2YLR398C YLR040CQ07988 224 aa5.79□□□□□ -1.48
SKI2YLR398C FCY22Q12119 530 aa5.79□□□□□ -1.48
SKI2YLR398C MRX4Q12467 430 aa5.79□□□□□ -1.48
SKI2YLR398C FRE6Q12473 712 aa5.79□□□□□ -1.48
SKI2YLR398C YPK1P12688 680 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C TRM1P15565 570 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C DAL81P21657 970 aa5.78□□□□□ -1.48
SKI2YLR398C PRE9P23638 258 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C VMA16P23968 213 aa5.78□□□□□ -1.48
SKI2YLR398C MET22P32179 357 aa5.78□□□□□ -1.48
SKI2YLR398C NUP42P49686 430 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C YAF9P53930 226 aa5.78□□□□□ -1.48
SKI2YLR398C DIG2Q03373 323 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C TSA2Q04120 196 aa5.78□□□□□ -1.48
SKI2YLR398C CPA1P07258 411 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C SEC59P20048 519 aa5.78□□□□□ -1.48
SKI2YLR398C SPO13P23624 291 aa5.78□□□□□ -1.48
SKI2YLR398C IDH1P28834 360 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
SKI2YLR398C KRE6P32486 720 aa5.78□□□□□ -1.48
SKI2YLR398C SSN3P39073 555 aa5.78□□□□□ -1.48
SKI2YLR398C GAB1P41733 394 aa5.78□□□□□ -1.48
SKI2YLR398C TAX4P47030 604 aa5.78□□□□□ -1.48
SKI2YLR398C AMA1P50082 593 aa5.78□□□□□ -1.48
SKI2YLR398C INN1P53901 409 aa5.78□□□□□ -1.48
SKI2YLR398C NUP100Q02629 959 aa5.78□□□□□ -1.48
SKI2YLR398C BLS1Q06071 122 aa5.78□□□□□ -1.48
SKI2YLR398C YFH1Q07540 174 aa5.78□□□□□ -1.48
SKI2YLR398C DGK1Q12382 290 aa5.78□□□□□ -1.48
SKI2YLR398C RPS31P05759 152 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C UBI4P0CG63 381 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C RPL40AP0CH08 128 aaKnown RBP5.78□□□□□ -1.48
SKI2YLR398C RPL40BP0CH09 128 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms