RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	HNT3	Q08702	217 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	UIP4	Q08926	304 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	MCP1	Q12106	302 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	SPC3	Q12133	184 aa		4.14	□□□□□ -1.75
CBF5	YLR175W	YGK3	Q12222	375 aa	Predicted RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	GLT1	Q12680	2145 aa	Known RBP	4.14	□□□□□ -1.75
CBF5	YLR175W	CDC9	P04819	755 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	MET17	P06106	444 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ARF1	P11076	181 aa	Known RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	ENA1	P13587	1091 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ERD2	P18414	219 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	PHO80	P20052	293 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	LDB16	P25587	256 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	SUR1	P33300	382 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	HIS7	P33734	552 aa	Known RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	MSN4	P33749	630 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	NIC96	P34077	839 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	JEN1	P36035	616 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	YKR073C	P36153	106 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	SKN7	P38889	622 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	CHL4	P38907	458 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	PEX7	P39108	375 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	DDI1	P40087	428 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	HXT9	P40885	567 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	CIN1	P40987	1014 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	STB1	P42845	420 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	IRC5	P43610	853 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	IRC6	P43615	237 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	COS10	P52924	374 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	MPP6	P53725	186 aa	Predicted RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	HXT11	P54862	567 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ENA2	Q01896	1091 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	OST6	Q03723	332 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	EKI1	Q03764	534 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	RRP17	Q04031	235 aa	Predicted RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	SEI1	Q06058	285 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	UTP21	Q06078	939 aa	Predicted RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	YLR040C	Q07988	224 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ENB1	Q08299	606 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	RAX1	Q08760	435 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	YOR376W	Q08900	122 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ENV7	Q12003	364 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	YOR289W	Q12012	251 aa	Predicted RBP	4.13	□□□□□ -1.75
CBF5	YLR175W	HER1	Q12276	1246 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	NPC2	Q12408	173 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	SET6	Q12529	373 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ENA5	Q12691	1091 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	YDL007C-A	Q2V2Q0	85 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	VCX1	Q99385	411 aa		4.13	□□□□□ -1.75
CBF5	YLR175W	ADE5,7	P07244	802 aa	Known RBP	4.12	□□□□□ -1.75
CBF5	YLR175W	ERD1	P16151	362 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	NUP1	P20676	1076 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	SEC62	P21825	274 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	AIM17	P23180	465 aa	Known RBP	4.12	□□□□□ -1.75
CBF5	YLR175W	ARC19	P33204	171 aa	Known RBP	4.12	□□□□□ -1.75
CBF5	YLR175W	SLC1	P33333	303 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	MTC2	P34246	357 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	YKL071W	P36086	256 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	RPP1	P38786	293 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	APE4	P38821	490 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	MDM31	P38880	579 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CBF5	YLR175W	GDI1	P39958	451 aa	Known RBP	4.12	□□□□□ -1.75
CBF5	YLR175W	SER3	P40054	469 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	PKP1	P40530	394 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	QRI7	P43122	407 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	IRC7	P43623	340 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	MNT4	P53745	580 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	GRX5	Q02784	150 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	SRL4	Q03085	281 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	DML1	Q03652	475 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	GRX3	Q03835	250 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	YDR514C	Q04408	483 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	MRPL1	Q04599	285 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	GAL83	Q04739	417 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	FMP42	Q04991	504 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	NEJ1	Q06148	342 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	GSH2	Q08220	491 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	YDL109C	Q12103	647 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	RLM1	Q12224	676 aa		4.12	□□□□□ -1.75
CBF5	YLR175W	PRP46	Q12417	451 aa	Predicted RBP	4.12	□□□□□ -1.75
CBF5	YLR175W	SEC12	P11655	471 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	NCP1	P16603	691 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CBF5	YLR175W	YPK2	P18961	677 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	PRP28	P23394	588 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HSP30	P25619	332 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	EHD3	P28817	500 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	HSP150	P32478	413 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	MDL1	P33310	695 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	FMP23	P38231	175 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	MTC4	P38335	694 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	RPS20	P38701	121 aa	Known RBP	4.11	□□□□□ -1.75
CBF5	YLR175W	PTC7	P38797	343 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	YJL193W	P39542	402 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	CAF16	P43569	289 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	BUD17	P53727	317 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	ATG21	Q02887	496 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	SNZ1	Q03148	297 aa		4.11	□□□□□ -1.75
CBF5	YLR175W	PFA5	Q03289	374 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms