RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W PHO90P39535 881 aa6.81□□□□□ -1.32
SNF7YLR025W ELO1P39540 310 aa6.81□□□□□ -1.32
SNF7YLR025W PRP39P39682 629 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W TIF34P40217 347 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W PGA1P53896 198 aa6.81□□□□□ -1.32
SNF7YLR025W CTL1Q03220 320 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W AIM36Q03798 255 aa6.81□□□□□ -1.32
SNF7YLR025W SPC19Q03954 165 aa6.81□□□□□ -1.32
SNF7YLR025W YFT2Q06676 274 aa6.81□□□□□ -1.32
SNF7YLR025W YOR283WQ12040 230 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W MTR10Q99189 972 aa6.81□□□□□ -1.32
SNF7YLR025W GCN4P03069 281 aa6.8□□□□□ -1.32
SNF7YLR025W ADE8P04161 214 aa6.8□□□□□ -1.32
SNF7YLR025W GRX2P17695 143 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W EXG1P23776 448 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W SNC1P31109 117 aa6.8□□□□□ -1.32
SNF7YLR025W MDL1P33310 695 aa6.8□□□□□ -1.32
SNF7YLR025W JEN1P36035 616 aa6.8□□□□□ -1.32
SNF7YLR025W BAT1P38891 393 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W GID8P40208 455 aa6.8□□□□□ -1.32
SNF7YLR025W IBA57P47158 497 aa6.8□□□□□ -1.32
SNF7YLR025W TOS2P50078 622 aa6.8□□□□□ -1.32
SNF7YLR025W TPN1P53099 579 aa6.8□□□□□ -1.32
SNF7YLR025W ERV29P53337 310 aa6.8□□□□□ -1.32
SNF7YLR025W RPL6AQ02326 176 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W REC102Q02721 264 aa6.8□□□□□ -1.32
SNF7YLR025W DML1Q03652 475 aa6.8□□□□□ -1.32
SNF7YLR025W SNO4Q04902 237 aa6.8□□□□□ -1.32
SNF7YLR025W RRP9Q06506 573 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W YPR091CQ06833 770 aa6.8□□□□□ -1.32
SNF7YLR025W IRC13Q08630 104 aa6.8□□□□□ -1.32
SNF7YLR025W YOR378WQ08902 515 aa6.8□□□□□ -1.32
SNF7YLR025W HSP33Q08914 237 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W HSP32Q08992 237 aa6.8□□□□□ -1.32
SNF7YLR025W YOL107WQ12239 342 aa6.8□□□□□ -1.32
SNF7YLR025W YDR262WQ12331 272 aa6.8□□□□□ -1.32
SNF7YLR025W HTZ1Q12692 134 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W GLT1Q12680 2145 aaKnown RBP6.8□□□□□ -1.32
SNF7YLR025W KIN28P06242 306 aa6.79□□□□□ -1.32
SNF7YLR025W SPS2P08459 502 aa6.79□□□□□ -1.32
SNF7YLR025W RPS18AP0CX55 146 aaKnown RBP6.79□□□□□ -1.32
SNF7YLR025W RPS18BP0CX56 146 aaPredicted RBP6.79□□□□□ -1.32
SNF7YLR025W DPM1P14020 267 aaKnown RBP6.79□□□□□ -1.32
SNF7YLR025W HIS7P33734 552 aaKnown RBP6.79□□□□□ -1.32
SNF7YLR025W FMP46P36141 133 aaKnown RBP6.79□□□□□ -1.32
SNF7YLR025W DTR1P38125 572 aa6.79□□□□□ -1.32
SNF7YLR025W VRG4P40107 337 aa6.79□□□□□ -1.32
SNF7YLR025W LRO1P40345 661 aa6.79□□□□□ -1.32
SNF7YLR025W CIN1P40987 1014 aa6.79□□□□□ -1.32
SNF7YLR025W QRI7P43122 407 aa6.79□□□□□ -1.32
SNF7YLR025W SFH5P47008 294 aa6.79□□□□□ -1.32
SNF7YLR025W APS3P47064 194 aa6.79□□□□□ -1.32
SNF7YLR025W IMO32P53219 342 aa6.79□□□□□ -1.32
SNF7YLR025W VOA1P53262 265 aa6.79□□□□□ -1.32
SNF7YLR025W PAU12P53343 120 aa6.79□□□□□ -1.32
SNF7YLR025W PLM2Q04383 521 aa6.79□□□□□ -1.32
SNF7YLR025W RRN11Q04712 507 aa6.79□□□□□ -1.32
SNF7YLR025W YPR172WQ06608 200 aa6.79□□□□□ -1.32
SNF7YLR025W SYO1Q07395 620 aa6.79□□□□□ -1.32
SNF7YLR025W SRO7Q12038 1033 aa6.79□□□□□ -1.32
SNF7YLR025W RTC5Q12108 567 aaKnown RBP6.79□□□□□ -1.32
SNF7YLR025W YDL211CQ12121 372 aa6.79□□□□□ -1.32
SNF7YLR025W YDL177CQ12257 170 aa6.79□□□□□ -1.32
SNF7YLR025W BBP1Q12365 385 aa6.79□□□□□ -1.32
SNF7YLR025W RAD52P06778 471 aaKnown RBP6.78□□□□□ -1.32
SNF7YLR025W HMG1P12683 1054 aa6.78□□□□□ -1.32
SNF7YLR025W STE12P13574 688 aa6.78□□□□□ -1.32
SNF7YLR025W ERD1P16151 362 aa6.78□□□□□ -1.32
SNF7YLR025W AAC3P18238 307 aa6.78□□□□□ -1.32
SNF7YLR025W PRE7P23724 241 aaKnown RBP6.78□□□□□ -1.32
SNF7YLR025W KRE6P32486 720 aa6.78□□□□□ -1.32
SNF7YLR025W CDC13P32797 924 aaKnown RBP6.78□□□□□ -1.32
SNF7YLR025W CLG1P35190 452 aa6.78□□□□□ -1.32
SNF7YLR025W ECM15P35195 104 aa6.78□□□□□ -1.32
SNF7YLR025W MTH1P35198 433 aa6.78□□□□□ -1.32
SNF7YLR025W PAU24P38155 120 aa6.78□□□□□ -1.32
SNF7YLR025W MNN10P50108 393 aaKnown RBP6.78□□□□□ -1.32
SNF7YLR025W RNH70P53331 553 aa6.78□□□□□ -1.32
SNF7YLR025W OGG1P53397 376 aaPredicted RBP6.78□□□□□ -1.32
SNF7YLR025W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
SNF7YLR025W THI73Q07904 523 aa6.78□□□□□ -1.32
SNF7YLR025W CRT10Q08226 957 aa6.78□□□□□ -1.32
SNF7YLR025W BRX1Q08235 291 aaKnown RBP6.78□□□□□ -1.32
SNF7YLR025W TIR4Q12218 487 aaPredicted RBP6.78□□□□□ -1.32
SNF7YLR025W RTR2Q12378 196 aa6.78□□□□□ -1.32
SNF7YLR025W CYC1P00044 109 aaPredicted RBP6.77□□□□□ -1.33
SNF7YLR025W GAL4P04386 881 aa6.77□□□□□ -1.33
SNF7YLR025W ERD2P18414 219 aa6.77□□□□□ -1.33
SNF7YLR025W YCR100CP25606 316 aa6.77□□□□□ -1.33
SNF7YLR025W YEF1P32622 495 aa6.77□□□□□ -1.33
SNF7YLR025W PPQ1P32945 549 aa6.77□□□□□ -1.33
SNF7YLR025W ECT1P33412 323 aa6.77□□□□□ -1.33
SNF7YLR025W MRPL3P36516 390 aa6.77□□□□□ -1.33
SNF7YLR025W DPB11P47027 764 aaPredicted RBP6.77□□□□□ -1.33
SNF7YLR025W FHN1P53279 174 aa6.77□□□□□ -1.33
SNF7YLR025W YDR541CQ03049 344 aa6.77□□□□□ -1.33
SNF7YLR025W NGL2Q03264 515 aaKnown RBP6.77□□□□□ -1.33
SNF7YLR025W SCS7Q03529 384 aa6.77□□□□□ -1.33
SNF7YLR025W INP1Q03694 420 aa6.77□□□□□ -1.33
SNF7YLR025W YMR130WQ04223 302 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms