RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W YMR226CQ05016 267 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W PBA1Q05778 276 aa1.07□□□□□ -2.24
APL1YJR005W YLR297WQ05899 129 aa1.07□□□□□ -2.24
APL1YJR005W SFH1Q06168 426 aa1.07□□□□□ -2.24
APL1YJR005W YLR413WQ06689 675 aa1.07□□□□□ -2.24
APL1YJR005W MFG1Q07684 458 aa1.07□□□□□ -2.24
APL1YJR005W RFU1Q08003 200 aa1.07□□□□□ -2.24
APL1YJR005W YOL075CQ08234 1294 aa1.07□□□□□ -2.24
APL1YJR005W NSL1Q12143 216 aa1.07□□□□□ -2.24
APL1YJR005W RRP42Q12277 265 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W YOR214CQ12282 236 aa1.07□□□□□ -2.24
APL1YJR005W ATG34Q12292 412 aa1.07□□□□□ -2.24
APL1YJR005W EMP46Q12396 444 aa1.07□□□□□ -2.24
APL1YJR005W ATG31Q12421 196 aa1.07□□□□□ -2.24
APL1YJR005W AGC1Q12482 902 aa1.07□□□□□ -2.24
APL1YJR005W TAF2P23255 1407 aa1.07□□□□□ -2.24
APL1YJR005W YLR419WQ06698 1435 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W SPT6P23615 1451 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W UFD4P33202 1483 aa1.07□□□□□ -2.24
APL1YJR005W PDR10P51533 1564 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-HO13535 1793 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-DR5P0C2I2 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-DR6P0C2I3 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-LR2P0C2I5 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-LR3P0C2I6 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TY1B-PR1P0C2I9 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TY1B-PR2P0C2J0 1756 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-PR3P0C2J1 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TY1B-JR1P47098 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-ML2Q03434 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TY1B-ER1Q03612 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-ML1Q04711 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TY1B-GR2Q12269 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-OLQ12273 1755 aa1.07□□□□□ -2.24
APL1YJR005W TY1B-PLQ12414 1755 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W THO2P53552 1597 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W GEA1P47102 1408 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W ROM2P51862 1356 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TDH2P00358 332 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W TDH3P00359 332 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
APL1YJR005W ATP6P00854 259 aa1.07□□□□□ -2.24
APL1YJR005W MES1P00958 751 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W HIP1P06775 603 aa1.07□□□□□ -2.24
APL1YJR005W MSF1P08425 469 aa1.07□□□□□ -2.24
APL1YJR005W RPL1AP0CX43 217 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W RPL1BP0CX44 217 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W MRP1P10662 321 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W CDC24P11433 854 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W NHP6AP11632 93 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W SNF6P18888 332 aa1.07□□□□□ -2.24
APL1YJR005W SAR1P20606 190 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W SLY1P22213 666 aa1.07□□□□□ -2.24
APL1YJR005W CPR2P23285 205 aa1.07□□□□□ -2.24
APL1YJR005W CNB1P25296 175 aa1.07□□□□□ -2.24
APL1YJR005W PBN1P25580 416 aa1.07□□□□□ -2.24
APL1YJR005W YCL068CP25593 260 aa1.07□□□□□ -2.24
APL1YJR005W AFG1P32317 509 aa1.07□□□□□ -2.24
APL1YJR005W PRP21P32524 280 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W SPR1P32603 445 aa1.07□□□□□ -2.24
APL1YJR005W GCG1P32656 232 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W MSN2P33748 704 aa1.07□□□□□ -2.24
APL1YJR005W PTC1P35182 281 aa1.07□□□□□ -2.24
APL1YJR005W RCN1P36054 211 aa1.07□□□□□ -2.24
APL1YJR005W TVP38P36164 337 aa1.07□□□□□ -2.24
APL1YJR005W SKG1P36169 355 aa1.07□□□□□ -2.24
APL1YJR005W DTR1P38125 572 aa1.07□□□□□ -2.24
APL1YJR005W FMP23P38231 175 aa1.07□□□□□ -2.24
APL1YJR005W SHE3P38272 425 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W EFM1P38732 585 aa1.07□□□□□ -2.24
APL1YJR005W YHR122WP38829 231 aa1.07□□□□□ -2.24
APL1YJR005W CYC2P38909 366 aa1.07□□□□□ -2.24
APL1YJR005W FET3P38993 636 aa1.07□□□□□ -2.24
APL1YJR005W CCT2P39076 527 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W NPT1P39683 429 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W AFG3P39925 761 aa1.07□□□□□ -2.24
APL1YJR005W YMR147WP40218 223 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W PDS1P40316 373 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W RFC4P40339 323 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W SER33P40510 469 aa1.07□□□□□ -2.24
APL1YJR005W EFM4P40516 257 aa1.07□□□□□ -2.24
APL1YJR005W FMP32P43557 207 aa1.07□□□□□ -2.24
APL1YJR005W TOS3P43637 560 aa1.07□□□□□ -2.24
APL1YJR005W AIM22P47051 409 aa1.07□□□□□ -2.24
APL1YJR005W COS5P47187 383 aa1.07□□□□□ -2.24
APL1YJR005W AVT4P50944 713 aa1.07□□□□□ -2.24
APL1YJR005W NBP35P52920 328 aa1.07□□□□□ -2.24
APL1YJR005W TAF6P53040 516 aa1.07□□□□□ -2.24
APL1YJR005W UFD1P53044 361 aa1.07□□□□□ -2.24
APL1YJR005W SDT1P53078 280 aa1.07□□□□□ -2.24
APL1YJR005W YGL159WP53110 370 aa1.07□□□□□ -2.24
APL1YJR005W SHY1P53266 389 aa1.07□□□□□ -2.24
APL1YJR005W YGR117CP53270 476 aa1.07□□□□□ -2.24
APL1YJR005W YIP3P53633 176 aa1.07□□□□□ -2.24
APL1YJR005W COS1P53822 381 aa1.07□□□□□ -2.24
APL1YJR005W YNL140CP53910 189 aa1.07□□□□□ -2.24
APL1YJR005W YLR152CP54072 576 aa1.07□□□□□ -2.24
APL1YJR005W PRP38Q00723 242 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W RPA49Q01080 415 aaPredicted RBP1.07□□□□□ -2.24
APL1YJR005W UTP6Q02354 440 aaKnown RBP1.07□□□□□ -2.24
APL1YJR005W DYN2Q02647 92 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 636.9 ms