RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C LEM3P42838 414 aa3.17□□□□□ -1.9
VPS53YJL029C GCN20P43535 752 aaKnown RBP3.17□□□□□ -1.9
VPS53YJL029C EXG2P52911 562 aa3.17□□□□□ -1.9
VPS53YJL029C YGL101WP53144 215 aa3.17□□□□□ -1.9
VPS53YJL029C PCP1P53259 346 aa3.17□□□□□ -1.9
VPS53YJL029C YLR352WQ06479 807 aa3.17□□□□□ -1.9
VPS53YJL029C YOR097CQ12274 175 aaPredicted RBP3.17□□□□□ -1.9
VPS53YJL029C NPC2Q12408 173 aa3.17□□□□□ -1.9
VPS53YJL029C HMG1P12683 1054 aa3.17□□□□□ -1.9
VPS53YJL029C RPI1P23250 407 aaKnown RBP3.17□□□□□ -1.9
VPS53YJL029C TIM12P32830 109 aa3.17□□□□□ -1.9
VPS53YJL029C ECM34P38728 170 aa3.17□□□□□ -1.9
VPS53YJL029C NAB3P38996 802 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
VPS53YJL029C SHO1P40073 367 aa3.17□□□□□ -1.9
VPS53YJL029C RFC4P40339 323 aaKnown RBP3.17□□□□□ -1.9
VPS53YJL029C AGP3P43548 558 aa3.17□□□□□ -1.9
VPS53YJL029C NOP9P47077 666 aaKnown RBP3.17□□□□□ -1.9
VPS53YJL029C MSY1P48527 492 aa3.17□□□□□ -1.9
VPS53YJL029C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
VPS53YJL029C ACS1Q01574 713 aa3.17□□□□□ -1.9
VPS53YJL029C SPR6Q01684 191 aa3.17□□□□□ -1.9
VPS53YJL029C SCS7Q03529 384 aa3.17□□□□□ -1.9
VPS53YJL029C PLB2Q03674 706 aa3.17□□□□□ -1.9
VPS53YJL029C API2Q04413 109 aa3.17□□□□□ -1.9
VPS53YJL029C COX20Q04935 205 aa3.17□□□□□ -1.9
VPS53YJL029C PML1Q07930 204 aaPredicted RBP3.17□□□□□ -1.9
VPS53YJL029C CRT10Q08226 957 aa3.17□□□□□ -1.9
VPS53YJL029C YPL191CQ08930 360 aa3.17□□□□□ -1.9
VPS53YJL029C YDL180WQ12301 547 aa3.17□□□□□ -1.9
VPS53YJL029C YPR071WQ12346 211 aa3.17□□□□□ -1.9
VPS53YJL029C TRA1P38811 3744 aa3.16□□□□□ -1.9
VPS53YJL029C GPM1P00950 247 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C SPO7P18410 259 aa3.16□□□□□ -1.9
VPS53YJL029C CNA1P23287 553 aa3.16□□□□□ -1.9
VPS53YJL029C HSP30P25619 332 aa3.16□□□□□ -1.9
VPS53YJL029C MTC2P34246 357 aa3.16□□□□□ -1.9
VPS53YJL029C MAE1P36013 669 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C TOK1P40310 691 aa3.16□□□□□ -1.9
VPS53YJL029C YFL066CP43538 392 aa3.16□□□□□ -1.9
VPS53YJL029C TOS2P50078 622 aa3.16□□□□□ -1.9
VPS53YJL029C YKR011CQ02209 353 aa3.16□□□□□ -1.9
VPS53YJL029C RPL6AQ02326 176 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C VPS36Q06696 566 aa3.16□□□□□ -1.9
VPS53YJL029C RAF1Q06891 181 aa3.16□□□□□ -1.9
VPS53YJL029C OSW1Q08692 278 aa3.16□□□□□ -1.9
VPS53YJL029C VIK1Q12045 647 aa3.16□□□□□ -1.9
VPS53YJL029C RPL11AP0C0W9 174 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C TFS1P14306 219 aa3.16□□□□□ -1.9
VPS53YJL029C PET9P18239 318 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C MDH2P22133 377 aa3.16□□□□□ -1.9
VPS53YJL029C YCK1P23291 538 aa3.16□□□□□ -1.9
VPS53YJL029C CLB2P24869 491 aa3.16□□□□□ -1.9
VPS53YJL029C YCL042WP25572 119 aa3.16□□□□□ -1.9
VPS53YJL029C POL4P25615 582 aa3.16□□□□□ -1.9
VPS53YJL029C PTC6P25646 442 aa3.16□□□□□ -1.9
VPS53YJL029C MRPL6P32904 214 aa3.16□□□□□ -1.9
VPS53YJL029C SPC29P33419 253 aa3.16□□□□□ -1.9
VPS53YJL029C PRS3P38689 320 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C PTH1P38876 190 aaKnown RBP3.16□□□□□ -1.9
VPS53YJL029C MRK1P50873 501 aa3.16□□□□□ -1.9
VPS53YJL029C YGR126WP53274 230 aa3.16□□□□□ -1.9
VPS53YJL029C YDR239CQ03780 787 aa3.16□□□□□ -1.9
VPS53YJL029C ASA1Q06822 443 aa3.16□□□□□ -1.9
VPS53YJL029C YOR343CQ12484 108 aa3.16□□□□□ -1.9
VPS53YJL029C SPO24Q3E752 67 aa3.16□□□□□ -1.9
VPS53YJL029C RPL11BQ3E757 174 aaPredicted RBP3.16□□□□□ -1.9
VPS53YJL029C YOL087CQ99247 1116 aa3.16□□□□□ -1.9
VPS53YJL029C YAL064W-BO13512 126 aa3.15□□□□□ -1.9
VPS53YJL029C YOL162WP0CF19 215 aa3.15□□□□□ -1.9
VPS53YJL029C RER1P25560 188 aa3.15□□□□□ -1.9
VPS53YJL029C CAM1P29547 415 aaKnown RBP3.15□□□□□ -1.9
VPS53YJL029C PDB1P32473 366 aaKnown RBP3.15□□□□□ -1.9
VPS53YJL029C MTR2P34232 184 aaKnown RBP3.15□□□□□ -1.9
VPS53YJL029C BAP2P38084 609 aa3.15□□□□□ -1.9
VPS53YJL029C SPO73P40031 143 aa3.15□□□□□ -1.9
VPS53YJL029C YNL195CP40168 261 aa3.15□□□□□ -1.9
VPS53YJL029C YIL169CP40442 995 aa3.15□□□□□ -1.9
VPS53YJL029C VHR1P40522 640 aa3.15□□□□□ -1.9
VPS53YJL029C ARF3P40994 183 aaRIP-Chip data3.15□□□□□ -1.9not detected
VPS53YJL029C GDS1P41913 522 aa3.15□□□□□ -1.9
VPS53YJL029C YFR054CP43622 192 aa3.15□□□□□ -1.9
VPS53YJL029C HNT2P49775 206 aa3.15□□□□□ -1.9
VPS53YJL029C SNF12P53628 566 aa3.15□□□□□ -1.9
VPS53YJL029C TPS1Q00764 495 aaKnown RBP3.15□□□□□ -1.9
VPS53YJL029C ABZ2Q03266 374 aa3.15□□□□□ -1.9
VPS53YJL029C SNO4Q04902 237 aa3.15□□□□□ -1.9
VPS53YJL029C MLC2Q06580 163 aa3.15□□□□□ -1.9
VPS53YJL029C HSP33Q08914 237 aaKnown RBP3.15□□□□□ -1.9
VPS53YJL029C HSP32Q08992 237 aa3.15□□□□□ -1.9
VPS53YJL029C RIB3Q99258 208 aa3.15□□□□□ -1.9
VPS53YJL029C YPK2P18961 677 aa3.15□□□□□ -1.91
VPS53YJL029C PRP19P32523 503 aaKnown RBP3.15□□□□□ -1.91
VPS53YJL029C SRO77P38163 1010 aa3.15□□□□□ -1.91
VPS53YJL029C AIM3P38266 947 aaKnown RBP3.15□□□□□ -1.91
VPS53YJL029C RPP1P38786 293 aa3.15□□□□□ -1.91
VPS53YJL029C THO1P40040 218 aaKnown RBP3.15□□□□□ -1.91
VPS53YJL029C IDP2P41939 412 aa3.15□□□□□ -1.91
VPS53YJL029C FAR7P43592 221 aa3.15□□□□□ -1.91
VPS53YJL029C RMR1P53060 241 aa3.15□□□□□ -1.91
VPS53YJL029C MKC7P53379 596 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms